Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_N06
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57621| Best HMM Match : Spermine_synth (HMM E-Value=0.1) 145 2e-35
SB_5216| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_59207| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32) 30 1.4
SB_11258| Best HMM Match : efhand (HMM E-Value=1.4e-08) 30 1.9
SB_51903| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5) 29 2.5
SB_11589| Best HMM Match : DUF165 (HMM E-Value=4.6) 29 2.5
SB_5872| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5) 29 2.5
SB_922| Best HMM Match : DUF1532 (HMM E-Value=4.1) 29 2.5
SB_40607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_42955| Best HMM Match : Oxidored_q1_N (HMM E-Value=4.4) 28 5.7
SB_33292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_57621| Best HMM Match : Spermine_synth (HMM E-Value=0.1)
Length = 627
Score = 145 bits (352), Expect = 2e-35
Identities = 74/181 (40%), Positives = 109/181 (60%), Gaps = 1/181 (0%)
Frame = +3
Query: 111 LLPRSHKEFSEKDYWNKFFXKRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSL 290
L+P+ + WNK K ++ +EW+ EY LC ++KY+K D +L CG+S L
Sbjct: 5 LVPQKSNNLFGTEQWNKLM-KEVSRPYEWHSEYEILCDLMHKYVKLNDRLLRLACGDSKL 63
Query: 291 SADLYDVGYVNITNVDVSEVVIKQMKNVN-KARTNMKFMCMDATRMSFEXEAFNVVLXKG 467
+LYDVGY NI +VD SE VIK+M+ N + +M++ MD T + ++ E+FNVV K
Sbjct: 64 GENLYDVGYRNIISVDSSEKVIKKMRKRNDSGKRDMEYTRMDVTDLKYDDESFNVVFDKQ 123
Query: 468 TLDALMPDATEXTNAIIXKYFSEIKRVLKLGGRFVCISLLQSHILAKLMEGFCXKSWMFR 647
LD + +E + K F+EI+RVLK+GGRF+ +L Q HIL KL+ F + W+ R
Sbjct: 124 WLDYTFTNTSEDILKKVDKTFAEIQRVLKVGGRFIVCTLAQDHILDKLLAHF-SQGWLVR 182
Query: 648 V 650
V
Sbjct: 183 V 183
>SB_5216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 120 bits (288), Expect = 1e-27
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 6/185 (3%)
Frame = +3
Query: 114 LPRSHKEFSEKDYWNKFFXKRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLS 293
LP+++ + +K+YWN F K FEW Y E L +++T D ILI GCGNS LS
Sbjct: 3 LPKNNSSYKDKEYWNNRFAKEDT--FEWCKSYKEFRHLLRGHVRTCDRILILGCGNSGLS 60
Query: 294 ADLYDVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATRMSFEXEAFNVVLXKGTL 473
D+Y+ GY +ITN+D S +VI+ MK A M++ MD T++ F +F+VV+ K TL
Sbjct: 61 EDMYNEGYTDITNIDYSPIVIENMKRKCHAMRGMEWKVMDITKLDFPPNSFDVVIEKATL 120
Query: 474 DALMPDATEXTNAIIXK------YFSEIKRVLKLGGRFVCISLLQSHILAKLMEGFCXKS 635
DAL+ + N + S++ +L+ G F+ I+ Q + + C +
Sbjct: 121 DALLVAEKDPWNPSVEALKTMECVLSKVSEILEPAGHFMSITFSQPNFRLPFLARSCY-N 179
Query: 636 WMFRV 650
W V
Sbjct: 180 WSISV 184
>SB_59207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 64.5 bits (150), Expect = 7e-11
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Frame = +3
Query: 138 SEKDYWNKFFXKRG-NKAFEWYGEYLELCGQLNKYIKTKDSILIT---GCGNSSLSADL- 302
S+ +W KF+ RG N FEW+ ++ ++ L+KYI KDS + T GCG S L
Sbjct: 23 SDMSFWEKFYKSRGPNNTFEWFLDFQDVHNSLDKYIH-KDSHINTLDLGCGTSEFCIQLF 81
Query: 303 -YDVGYVNITNVDVSEVVIKQMKNVNKAR----TNMKFMCMDATRMSFEXEAFNVVLXKG 467
Y G + +D SE I+ M+N+ + + + + F E F++++ KG
Sbjct: 82 YYLRGNCKVAGIDFSEEAIQVMRNLLRQHGLDDSVFSLHVGNVLDLPFSRECFDIIIDKG 141
Query: 468 TLDALMPDATEXTNAIIXKYFSEIKRVLKLGGRFVCIS 581
T DA++ T E RVLK G + S
Sbjct: 142 TADAVLRSPAAET--AFCAVLVEACRVLKSEGTILQFS 177
>SB_20314| Best HMM Match : RVT_1 (HMM E-Value=1e-32)
Length = 1556
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/111 (22%), Positives = 48/111 (43%)
Frame = +3
Query: 258 ILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATRMSFEX 437
++ G G + L +GY N+ +D+S+ +M N+ AR + + +S E
Sbjct: 196 VMDAGAGTGIVGEHLQQLGYTNVDGLDISQ----EMLNI--ARQKRVYKNLICAGLS-ET 248
Query: 438 EAFNVVLXKGTLDALMPDATEXTNAIIXKYFSEIKRVLKLGGRFVCISLLQ 590
E + G + ++ T + E++R LK GG +C ++ Q
Sbjct: 249 EIAEI--ADGQYEGIVCSGTITVAHVKAASLGELRRWLKPGG-IICFTIRQ 296
>SB_11258| Best HMM Match : efhand (HMM E-Value=1.4e-08)
Length = 182
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 65 KATVKFLQTPNVYNEFTTEKSQRI 136
K TV+FLQ P+V++EF T +I
Sbjct: 105 KRTVQFLQLPSVFDEFDTNHDMKI 128
>SB_51903| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5)
Length = 529
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+ + + +ASG S+ P+ TL
Sbjct: 385 MASEDMRSKWPVSYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTL 433
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 35 MASEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 83
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 67 MASEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 115
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 99 MASEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 147
>SB_11589| Best HMM Match : DUF165 (HMM E-Value=4.6)
Length = 275
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+ + + +ASG S+ P+ TL
Sbjct: 163 MASEDMRSKWPVSYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTL 211
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 35 MASEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 83
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 67 MASEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 115
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 99 MASEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 147
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 131 MASEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 179
>SB_5872| Best HMM Match : Herpes_UL49_5 (HMM E-Value=3.5)
Length = 529
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+ + + +ASG S+ P+ TL
Sbjct: 385 MASEDMRSKWPVSYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTL 433
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+++ + +AS S+ P+ TL
Sbjct: 99 MANEDMRSKWPVSYVTLLVTQCVTTFNVYQDGMASEDMRSKWPVSYVTL 147
>SB_922| Best HMM Match : DUF1532 (HMM E-Value=4.1)
Length = 294
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 592 LCKSDMQTKRPPSFKTLLISEKYLXIMAFVXSVASGIRASRVPLXNTTL 446
+ DM++K P S+ TLL+ + + +ASG S+ P+ TL
Sbjct: 92 MASEDMRSKWPVSYVTLLVMQCVTTFNVYQGDMASGDIRSKWPVSYVTL 140
>SB_40607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/77 (15%), Positives = 35/77 (45%)
Frame = -3
Query: 538 ISEKYLXIMAFVXSVASGIRASRVPLXNTTLNASXSKDILVASMHINFILVLALFTFFIC 359
I+ Y + V + + +R + ++ + D+ + + + N++ ++ + +C
Sbjct: 2 IATAYPTDLCIVTAYPTDLRIVTAYPTDLSIVTAYPTDLSIMTAYPNYLSIVTAYPTDLC 61
Query: 358 LITTSETSTFVIFTYPT 308
++T T ++ YPT
Sbjct: 62 IVTAYPTDLRIVTAYPT 78
>SB_42955| Best HMM Match : Oxidored_q1_N (HMM E-Value=4.4)
Length = 435
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -2
Query: 440 FXFKRHSRSIHAHKLHIGSGFVYVFHLFNNNFRDIHICYIYI 315
F + H I +H F Y+ HL+ ++R IH+ + I
Sbjct: 391 FTYLIHLYPISYRTIHFSPLFTYLIHLYPISYRTIHVSPLLI 432
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -2
Query: 440 FXFKRHSRSIHAHKLHIGSGFVYVFHLFNNNFRDIHICYI 321
F + H I +H F Y+ HL+ ++R IH ++
Sbjct: 211 FTYLIHLYPISYRTIHFSPLFTYLIHLYPISYRTIHFSHL 250
>SB_33292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 99 FIMNLLPRSHKEFSEKDYWNKFFXKRGNKAFEWYGEYLELCG 224
F N++ R K + Y +K +G +W+ E +LCG
Sbjct: 412 FFRNMVNRERKVCKSRFYDSKVKQLKGENPKKWWDEVKQLCG 453
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,826,817
Number of Sequences: 59808
Number of extensions: 300485
Number of successful extensions: 797
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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