Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M16
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 94  RRSQKILLLKFVDYVKNRKASIVAQNVVYYIVRSVVINQTNIXSVQKISIVTGL 255
           +R ++    K   Y  N    IVA ++  Y+V       TN+   QK+SIVT L
Sbjct: 32  KRQERHSFYKIYKYTYN----IVAVSLTAYMVYIT----TNLRITQKLSIVTQL 77


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 109  ILLLKFVDYVKNRKASIVAQNVVYYIVRSVVINQTN 216
            I L + V+Y K +   +V    VYY     +I  T+
Sbjct: 1195 IQLKQVVNYKKKKFQRMVVARYVYYATIFTIITATS 1230


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 150 SKYCCPKCGI 179
           +K CC KCG+
Sbjct: 238 NKKCCEKCGL 247


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 87  DTTKITENTFAKICGLCEEQKSKYCCPKCGILY 185
           D  K  +N   KIC L +E    +     GIL+
Sbjct: 207 DIVKEHQNLHNKICNLIDEFNECFGLQILGILF 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,919
Number of Sequences: 336
Number of extensions: 2420
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)