Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_M16
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20620| Best HMM Match : zf-HIT (HMM E-Value=8.5e-10) 85 4e-17
SB_5266| Best HMM Match : VWA (HMM E-Value=0) 33 0.26
SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_25417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38) 29 4.3
SB_10657| Best HMM Match : zf-MYND (HMM E-Value=2.6e-06) 29 4.3
SB_41021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_14298| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31) 28 5.7
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 28 7.5
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 28 7.5
SB_44266| Best HMM Match : PCI (HMM E-Value=0.047) 28 7.5
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 28 7.5
SB_32621| Best HMM Match : Arv1 (HMM E-Value=4.2) 27 9.9
SB_5619| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_20620| Best HMM Match : zf-HIT (HMM E-Value=8.5e-10)
Length = 567
Score = 85.4 bits (202), Expect = 4e-17
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Frame = +3
Query: 117 AKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHLXCSENFYRDWVNEELSSQNVDEESK 296
A C C++Q SKY CP+C + YCS+ CY+ +KH+ C+E+FYR V + L + +
Sbjct: 22 ADTCFFCKKQFSKYTCPRCNVRYCSISCYRCEKHVECTEDFYRQNVMDALKLDSNCPDDP 81
Query: 297 RKMIEILKKMQNESXXXXXXXXXXXXXXXXXXXXXXXXXRIKNLXIN-DADAIWSALTEX 473
++IE+LK+++++ R++++ ++ D D +W AL +
Sbjct: 82 DRIIEMLKRLEDDG------------KGEGDEEGSGLEERLRDIDLDRDPDVLWDALGKA 129
Query: 474 EKNEFEALISQXDVGSILPQWEPWWTKRTK 563
E+ F + + + EPWW K
Sbjct: 130 EQQGFLSALKSGKFSHSITLLEPWWKPEIK 159
>SB_5266| Best HMM Match : VWA (HMM E-Value=0)
Length = 797
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 72 IMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHL 221
I + D + +F+++ L + + C +C I Y LGCYK + L
Sbjct: 500 IASDPDVDHVFTASFSELHSLEGSVRKRICLGECNIQYNKLGCYKEESSL 549
>SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Frame = +1
Query: 112 LLLKFVDYVKNRKASIV--AQNVVYYIVR------SVVINQTNIXSVQKISIVT 249
++ KFV+Y K R ASI+ A+ V YY VR S++ N V+ SI+T
Sbjct: 106 IITKFVNYYKVRDASIITSARRVNYYKVRQLLQSASIITKFVNYYKVRDASIIT 159
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 121 KFVDYVKNRKASIVAQNVVYYIVRSVVI 204
KFV+Y K R ASI+ + V YY VR I
Sbjct: 166 KFVNYYKVRDASIITKCVNYYKVRDASI 193
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = +1
Query: 112 LLLKFVDYVKNRKASIVA------QNVVYYIVR--SVVINQTNIXSVQKISIVT 249
++ KFV+Y K R ASI+ + V YY VR S++ N V+ SI+T
Sbjct: 142 IITKFVNYYKVRDASIITRCVNYYKFVNYYKVRDASIITKCVNYYKVRDASIIT 195
>SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +1
Query: 85 QIQRRSQKILLLKFVDYVKNRKASIVAQNVVYYIVRSVVINQTNIXSVQKISIVTGLMKN 264
+++R + + KFVDY + K AQ V + RS ++ +N+ ++I + L ++
Sbjct: 137 RLERTKLRGITRKFVDYAEKAKLRASAQAPVIFSYRSTRVHFSNMAEQEEIDPIISLQRS 196
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 120 KICGLCEEQKSKYCCPKCGILYCSLG 197
KICG+C + C CGI Y LG
Sbjct: 5876 KICGMCNLVRRDMCYTICGICYLHLG 5901
>SB_25417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 162 CPKCGILYCSLGCYKSDKHLXCSENFYRDWVNEELSSQNV 281
C +C + + ++GCYK KH +NE +S NV
Sbjct: 80 CNRCNVKFRAIGCYKDKKH---DRALSEQILNERDTSSNV 116
>SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 21 VQTAKYSDTVVISTTRRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCG 176
++T K D V R +++ K T A ICG C + K CP G
Sbjct: 74 LKTMKEEDPSVFKIQSRSKEQSKKYKGQNKTPAPICGKCGYKHGKDKCPATG 125
>SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38)
Length = 742
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 54 ISTTRRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYK-SDKHLXCS 230
+S R++ D D KI E C +C E+KS+ C + GC K + C
Sbjct: 607 LSQLRQLQDMQDVGKIEE------CMVCSEKKSQLLFKPCNHMVACEGCGSLMKKCIQCR 660
Query: 231 EN 236
EN
Sbjct: 661 EN 662
>SB_10657| Best HMM Match : zf-MYND (HMM E-Value=2.6e-06)
Length = 167
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 126 CGLCEEQKSKYCCPKC-GILYCSLGCYKSDK 215
CGL + + SK C KC + YCS C K D+
Sbjct: 131 CGLAKIRLSK--CGKCLKVYYCSRNCQKEDR 159
>SB_41021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 55 SVPLEE*WTKQIQRRSQKILLLKFVDYVKNRKASIVAQNVVYYIVRS 195
SVP+E K+ + Q + LLK +Y + N ++ I+RS
Sbjct: 104 SVPIEPKTAKETIEKKQSLSLLKVPNYSNKHYCAFCQPNNIFLIIRS 150
>SB_14298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 57 STTRRIMDETDTTKITE-NTF--AKICGLCEEQKSKYCCPKCGILYCSLG 197
S T + ++T T ++T N+F A GLC+ K+ K + YC LG
Sbjct: 177 SRTADVHEQTGTNRLTNGNSFGDAGCAGLCKGLKANGTLLKLSLNYCGLG 226
>SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)
Length = 156
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +3
Query: 231 ENFYRDWVNEELSSQNVDEESK----RKMIEILKKMQNES 338
+ FY W++++ + QN+D++S+ RK IE+ KK ++
Sbjct: 69 DEFYT-WIHDKNTLQNIDDKSRYHKIRKAIEMFKKYDKDA 107
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = +3
Query: 534 WEPWWTKRTKSKLXTXVCDDELDKNVDTCXQLKN 635
W+ WWT++ ++ T D D+C N
Sbjct: 1856 WKEWWTRKRHLQMFTKAYTQMTDSQWDSCPSTTN 1889
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 126 CGLC-EEQKSKYCCPKC-GILYCSLGC 200
C +C ++Q C +C G+LYCS C
Sbjct: 14 CAVCRQKQNHMKICTRCRGVLYCSRSC 40
>SB_44266| Best HMM Match : PCI (HMM E-Value=0.047)
Length = 205
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 112 LLLKFVDYVKNRKASIVAQNVVYYIVRSV-VINQTNIXSVQKISIVTGLM 258
LL F+DY+KN K ++ ++ +R+ I + N S+Q++ +TG++
Sbjct: 92 LLQDFIDYIKNNKVVMLEDLACHFGLRTQDAIERLN--SLQELERITGVI 139
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +3
Query: 72 IMDETDTTKITENTFAKI-CGLCEE----QKSKYCCPKCGI 179
I +E+D+ + + A+ CG+C+ +K Y C KCGI
Sbjct: 1908 ITEESDSCQSCKAPLAEFFCGICKHFTGNEKKPYHCDKCGI 1948
>SB_32621| Best HMM Match : Arv1 (HMM E-Value=4.2)
Length = 360
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 529 GNIEPTSX*LIKASNSFFSXSVRALQMASASLMXKFFIL 413
GN+ PT +++ S + V LQ++ L+ K FIL
Sbjct: 109 GNLLPTKVFILQPSGNLLPTKVFILQLSGNMLLIKVFIL 147
>SB_5619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 95 EDHRKYFC*NLWTM*RTEKQVLLPKMWYIILFARLL 202
ED RK C N W + ++ +Q ++ + W++ L+ +L
Sbjct: 179 EDERKP-CSNRWDLEKSARQFVIGRHWFVKLYVSVL 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,173
Number of Sequences: 59808
Number of extensions: 265941
Number of successful extensions: 901
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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