Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M03
         (649 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)              96   3e-20
SB_59715| Best HMM Match : Fz (HMM E-Value=0.026)                      30   1.9  
SB_21579| Best HMM Match : Phage_integrase (HMM E-Value=0.96)          29   3.3  
SB_5106| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-31)           28   7.5  
SB_25722| Best HMM Match : Peptidase_M24 (HMM E-Value=1.5e-32)         28   7.5  

>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1056

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 55/135 (40%), Positives = 79/135 (58%)
 Frame = +2

Query: 230 IETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHYVSPMA 409
           I   AYAK++LHA+KYPH AVNGVLL +   T +G     L ++DA+PLFHH   ++P+ 
Sbjct: 5   ISARAYAKMLLHASKYPHKAVNGVLLGEE-VTHDG----ELYVLDAVPLFHHCLGLAPLL 59

Query: 410 EVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYFPSAVFIVVDNK 589
           EVALTQ+++  ++    I GYY A E+  +N  +      I EKI +   +   +++DN 
Sbjct: 60  EVALTQVDSYCKTLGHHIIGYYQANEHIENNSPDNI-AYKIGEKIADQCSNGFILMIDNS 118

Query: 590 KMVQHLXSPAIKVHK 634
           KM       A KV K
Sbjct: 119 KMSISCDEVACKVIK 133


>SB_59715| Best HMM Match : Fz (HMM E-Value=0.026)
          Length = 145

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 467 GYYAACENFRDNIVERCPXLXIAEK 541
           G+Y AC++   +IVERCP +  + K
Sbjct: 80  GFYTACKDVCRSIVERCPSVFSSRK 104


>SB_21579| Best HMM Match : Phage_integrase (HMM E-Value=0.96)
          Length = 290

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +2

Query: 296 GVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENCVIAGYY 475
           G ++AD   TK GGR    +I + I      H+++P+  +A  + E +   +   +  Y 
Sbjct: 130 GAVMAD---TKTGGRWSPSEITEKIKQTRTGHHIAPIVFLAYPEDEKLCIMK--YLKEYL 184

Query: 476 AACENFRDN 502
              EN R+N
Sbjct: 185 LRTENLRNN 193


>SB_5106| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-31)
          Length = 445

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = -2

Query: 315 ASARSTPFTAQCGYLAACNIIL---A*APVSIDTSLILWLLLSKGCKYY*LNQVQSII 151
           + A+ T  ++Q G+ A    +L   A  PVS+ T    W++++ G KY+  N+ Q+ I
Sbjct: 314 SDAKLTVSSSQSGFPARSGRLLGASAWKPVSLSTDGNPWIMVNLGAKYHTGNRDQNTI 371


>SB_25722| Best HMM Match : Peptidase_M24 (HMM E-Value=1.5e-32)
          Length = 304

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 505 NIITEVLAGCIVTSYHTVF*LSYGFNLCECYFG 407
           ++  E L  C++TSYH +   +Y      CYFG
Sbjct: 71  HMAAESLDACVLTSYHNI---NYYSGFLYCYFG 100


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,128,111
Number of Sequences: 59808
Number of extensions: 323037
Number of successful extensions: 565
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)