Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_J21
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   1.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.9  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.8  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 383 LGHSPVRWSDQVHTSHGQNHSPTRKXIYIFLFTQVLVFFI 502
           L H PV  +        Q+    RK + + L T VL FFI
Sbjct: 264 LMHHPVAMTGTKTVMPSQSAIKYRKQVILMLGTVVLAFFI 303


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 103 GIHRQKSLRPS*FEKLCNXCTTPAKW 26
           G++R K L    F+ L   CTT + W
Sbjct: 12  GVNRCKLLSCKDFDTLYRDCTTASSW 37


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 198 DDCSHYCICGXGXX*SSSVCXTVEVF 121
           DDC ++ +C  G     S C   +VF
Sbjct: 190 DDCQYFYVCINGDTPRRSGCKLGQVF 215


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 574 ISFICVYFF*LITV 533
           ++F+C+Y F +IT+
Sbjct: 288 VTFLCLYLFLIITL 301


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 153 SSSVCXTVEVFC*AFELGFIDRRVSGHP 70
           +S  C   + FC   +  + DRR  G+P
Sbjct: 615 TSGTCSDGDTFCGIKDKLYPDRRSMGYP 642


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -3

Query: 637 FFVINSYYCFLYYSNLYSS*GISFICVYFF 548
           F ++   Y F Y   +++   +  +C+Y+F
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 616 YCFLYYSNLYSS*GISFICVYFF*LITVIF 527
           Y F Y   L++   +  +C+Y+F  + ++F
Sbjct: 239 YYFYYAFILFTVHLLLLVCIYYFYYMHLLF 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,566
Number of Sequences: 336
Number of extensions: 2510
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)