Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H15
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33079| Best HMM Match : FYVE (HMM E-Value=1.1e-29) 165 3e-41
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 80 2e-15
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 70 2e-12
SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_4021| Best HMM Match : FYVE (HMM E-Value=2.3e-32) 48 7e-06
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29) 44 8e-05
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 44 8e-05
SB_27781| Best HMM Match : Ank (HMM E-Value=0) 44 1e-04
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 44 1e-04
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 42 4e-04
SB_24791| Best HMM Match : FYVE (HMM E-Value=7.2e-14) 42 4e-04
SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05) 40 0.001
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 39 0.004
SB_54601| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_13532| Best HMM Match : FYVE (HMM E-Value=0.15) 35 0.050
SB_18135| Best HMM Match : Cytochrom_B561 (HMM E-Value=0.5) 30 1.9
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_31230| Best HMM Match : C1_1 (HMM E-Value=0.92) 29 2.5
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 29 4.4
SB_39958| Best HMM Match : SMF (HMM E-Value=1.2) 28 7.6
>SB_33079| Best HMM Match : FYVE (HMM E-Value=1.1e-29)
Length = 212
Score = 165 bits (401), Expect = 3e-41
Identities = 71/111 (63%), Positives = 85/111 (76%)
Frame = +3
Query: 321 PLXEVKLESLKDEGQYRNGWLIRTASKSFAVYAATATEKEXWMAHIEKCIXXLLXKSGKQ 500
PL E+KL +L+D+ +NGW I + KSFAVYAATATEK WMAHI KCI LL K+GK+
Sbjct: 13 PLEEIKLLTLEDDANLKNGWQIISTKKSFAVYAATATEKAEWMAHINKCIQDLLAKTGKK 72
Query: 501 PPSEHAAVWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKRY 653
HAAVWVP +E S CM C KT+FT INRRHHCRKCG+VVCG CS+K++
Sbjct: 73 AGGVHAAVWVPDSEASTCMSCMKTKFTAINRRHHCRKCGAVVCGACSTKKF 123
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 79.8 bits (188), Expect = 2e-15
Identities = 48/144 (33%), Positives = 74/144 (51%)
Frame = +3
Query: 195 EGVLTKICRKKPKARQFFLFNDILVYGXXXXXXXXXXXXXXXPLXEVKLESLKDEGQYRN 374
+G L K+CRK + R FFL D+L+Y PL +K+ L + ++ N
Sbjct: 1037 QGNLLKLCRKDMQERTFFLLTDVLLY-TAPVGGNQYKLRETLPLLGMKV-ILPESQEFVN 1094
Query: 375 GWLIRTASKSFAVYAATATEKEXWMAHIEKCIXXLLXKSGKQPPSEHAAVWVPXNEXSIC 554
+ I + ++SF + A+T+ E++ W+ + K G++ P VW+P ++C
Sbjct: 1095 EFSIISTTRSFTLSASTSAERDEWLEQDSED-----TKLGEKAP-----VWIPDARVTMC 1144
Query: 555 MHCKKTQFTVINRRHHCRKCGSVV 626
M C FTV NRRHHCR CG VV
Sbjct: 1145 MLCTD-DFTVTNRRHHCRGCGKVV 1167
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WVP E CM CK T+FT + RRHHCRKCG V CG CSSKR
Sbjct: 378 WVPDQEVKTCMACK-TRFTTVRRRHHCRKCGGVFCGACSSKR 418
>SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 49.2 bits (112), Expect = 3e-06
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
W+ +E +C C + +FT I R+HHCR+CG V+C C +++
Sbjct: 39 WMSDDEAHVCPLCSQ-KFTQIRRKHHCRQCGRVLCNKCCNEK 79
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 516 AAVWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
A W+ ++CM C FT+ RRHHCR CG + C CS +
Sbjct: 1291 APAWIRDESVTMCMLCDAL-FTLTRRRHHCRACGGIYCNACSHNK 1334
>SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WVP + C HCK+ +F +R+HHCR CG C CS +R
Sbjct: 628 WVPDALITNCHHCKQ-EFKGSDRKHHCRSCGQGFCDECSKQR 668
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WVP + C C F+ ++HHCR CG C CS+ +
Sbjct: 488 WVPNAQILACQSCDHV-FSADEKKHHCRACGGGFCDNCSANK 528
>SB_4021| Best HMM Match : FYVE (HMM E-Value=2.3e-32)
Length = 255
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WVP + C HCK+ +F +R+HHCR CG C CS +R
Sbjct: 190 WVPDALITNCHHCKQ-EFKGSDRKHHCRSCGQGFCDECSKQR 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WVP + C C F+ ++HHCR CG C CS+ +
Sbjct: 50 WVPNAQILACQSCDHV-FSADEKKHHCRACGGGFCDNCSANK 90
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSS 644
W+ +E + C CK +F+ + R+HHCR CG + C CS+
Sbjct: 938 WISDDEVNKCTSCK-AEFSFLLRKHHCRMCGRIFCHSCSN 976
>SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29)
Length = 551
Score = 44.4 bits (100), Expect = 8e-05
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSK 647
W ++ + C C K F++ R+HHCR CG + C C+SK
Sbjct: 352 WEEDSDVTNCNSCDKV-FSITLRKHHCRNCGLIFCSDCTSK 391
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 456 IEKCIXXLLXKSGKQPPSEHAAVWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGP 635
+E C +S ++ A W E +C C+ +F R+HHCR CG V C
Sbjct: 204 MEGCKFPAFNESDAMFSADSAPAWA---EGDVCHMCR-VKFGTFIRQHHCRNCGQVFCKK 259
Query: 636 CSSK 647
CSSK
Sbjct: 260 CSSK 263
>SB_27781| Best HMM Match : Ank (HMM E-Value=0)
Length = 485
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 531 PXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
P ++ C C +F++ NR+HHCR CG ++C CS K+
Sbjct: 422 PWSDGDSCHECGM-KFSIKNRKHHCRHCGRLLCAKCSCKQ 460
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 522 VWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSV 623
+WVP CM+C +F++I R+HHCR CG V
Sbjct: 525 IWVPDEVALFCMNCG-LKFSLIRRKHHCRACGKV 557
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 507 SEHAAVWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPC 638
S+ W+P C C + +F RRHHCR CG + C C
Sbjct: 121 SDFKQYWMPDETCKECYECGE-KFNTFRRRHHCRLCGQIFCYRC 163
>SB_24791| Best HMM Match : FYVE (HMM E-Value=7.2e-14)
Length = 64
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 507 SEHAAVWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPC 638
S+ W+P C C + +F RRHHCR CG + C C
Sbjct: 8 SDFKQYWMPDETCKECYECGE-KFNTFRRRHHCRLCGQIFCYRC 50
>SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05)
Length = 47
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 588 NRRHHCRKCGSVVCGPCS 641
NRRHHCR+CG VVC CS
Sbjct: 2 NRRHHCRRCGRVVCSVCS 19
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 579 TVINRRHHCRKCGSVVCGPCSSKR 650
TV R+HHCRKCG VC CS K+
Sbjct: 194 TVGVRQHHCRKCGRAVCQSCSEKQ 217
>SB_54601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1718
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 168 QSKGGSLLGEGVLTKICRKKPKARQFFLFNDILVYGXXXXXXXXXXXXXXX--PLXEVKL 341
+++G +L+ EG ++ + +KP + LFNDILV+ L L
Sbjct: 1210 ETQGRALIKEGQVSLMSVRKPY--KCLLFNDILVFAAKNATKQGEVELTLELKTLWVTDL 1267
Query: 342 ESLKDEGQYRNGWLIRTASKSFAVYAATATEKEXWMAHIEKCIXXLL 482
E + + + TA +SF +YA + EK+ W+ + I L
Sbjct: 1268 EGNDPQTNKEDAIELYTAERSFIMYAGSRNEKKHWLQKLRTSIAIQL 1314
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 432 EKEXWMAHIEKCIXXLLXKSGKQPPSEHAAVWVPXNEXSICMHCKKTQFTVINRRHHCRK 611
E E K L + + SE+ W ++ C +C+K T ++ +HC
Sbjct: 247 ESETVQRDFVKLSQTLQMQLAEMQESENEVRWEHKDDARECRNCQKPLNTNKDK-YHCHH 305
Query: 612 CGSVVCGPCSSKRY 653
CG + C C SK +
Sbjct: 306 CGKIFCEGCRSKTF 319
>SB_13532| Best HMM Match : FYVE (HMM E-Value=0.15)
Length = 65
Score = 35.1 bits (77), Expect = 0.050
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCR 608
WVP + + C +C T F + NR+HHCR
Sbjct: 39 WVPDHAATNCANCH-TGFWIANRKHHCR 65
>SB_18135| Best HMM Match : Cytochrom_B561 (HMM E-Value=0.5)
Length = 1595
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 261 CH*TKRIVVPLVFSCKFLSRHLHQARTRPCSARGCPELPKQLSTIAILLA 112
CH R + +F+ + LSRHL Q +R C + + ++ + LA
Sbjct: 1193 CHAIYRTIAVTLFAAQLLSRHLPQVLSRYLPHNCCHSIYRTIAVTGVYLA 1242
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 330 EVKLESLKDEGQYRNGWLIRTASKSFAVYAATATEKEXWMAHIEKCI 470
E +L S+K + +RN + I T+ K+F+ E W+ +++ I
Sbjct: 800 EAQLASVKQDPNHRNRFNIITSQKTFSFQVENDFEVSSWIEAVQRAI 846
>SB_31230| Best HMM Match : C1_1 (HMM E-Value=0.92)
Length = 174
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 528 VPXNEXSICMHCKKTQFTVINRRHHCRKC 614
VP S C C Q R HHC C
Sbjct: 85 VPVESSSACFFCHDCQMNSPGRAHHCNLC 113
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 202 TPSPSKDPPLLC*RLSRAAEAALHHCNSSCICFT 101
TP PS P +++ ++ AA H CN C+ F+
Sbjct: 322 TPVPSTSPSEPLTKVAESSTAADHPCNPQCLTFS 355
>SB_39958| Best HMM Match : SMF (HMM E-Value=1.2)
Length = 231
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 275 AIHQNVIKQKELSCLWFFPANFCQDTFTKQGPALALLE 162
A+ QN + Q+ + +W P C++ G ALA+LE
Sbjct: 192 ALVQNDLMQELVKQVWGLPLVLCKENDASLGAALAVLE 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,724,444
Number of Sequences: 59808
Number of extensions: 422168
Number of successful extensions: 960
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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