Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H15
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina... 58 7e-09
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 54 8e-08
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 48 5e-06
At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein ... 47 1e-05
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 46 2e-05
At1g29800.1 68414.m03643 zinc finger (FYVE type) family protein ... 45 5e-05
At3g23270.1 68416.m02933 regulator of chromosome condensation (R... 43 2e-04
At5g42140.1 68418.m05130 zinc finger protein, putative / regulat... 42 4e-04
At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator... 40 0.001
At5g12350.1 68418.m01453 zinc finger protein, putative / regulat... 40 0.002
At1g65920.1 68414.m07480 regulator of chromosome condensation (R... 40 0.002
At5g19420.1 68418.m02314 zinc finger protein, putative / regulat... 39 0.003
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 38 0.006
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 35 0.041
At3g02160.1 68416.m00188 hypothetical protein 29 2.0
At2g19650.1 68415.m02296 DC1 domain-containing protein contains ... 29 2.0
At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein ... 29 3.6
At1g18440.1 68414.m02301 peptidyl-tRNA hydrolase family protein ... 29 3.6
At4g10680.1 68417.m01745 transcription factor IIB (TFIIB) family... 28 4.7
At1g45243.1 68414.m05188 DC1 domain-containing protein contains ... 27 8.2
>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1791
Score = 57.6 bits (133), Expect = 7e-09
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +3
Query: 498 QPPSEHAAVWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSS 644
+P + W+P +C C QFT+INRRHHCR CG V CG C++
Sbjct: 27 EPATVSRDFWMPDQSCRVCYECD-CQFTLINRRHHCRHCGRVFCGKCTA 74
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1756
Score = 54.0 bits (124), Expect = 8e-08
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSS 644
W+P +C C QFTV NRRHHCR CG V C C++
Sbjct: 33 WMPDQSCPVCYECD-AQFTVFNRRHHCRLCGRVFCAKCAA 71
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = +3
Query: 498 QPPSEHAAVWVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
+P +E WVP S C C + F RRHHCR CG V C C+ R
Sbjct: 443 KPVNEEKDHWVPDEAVSKCTSCG-SDFGAFIRRHHCRNCGDVFCDKCTQGR 492
>At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein
contains Pfam domain PF01363: FYVE zinc finger
Length = 485
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVIN-RRHHCRKCGSVVCGPCSSKR 650
W+P + S CM C T FT I RHHCR CG + C CS R
Sbjct: 172 WLPDSLASTCMQCS-TPFTAITCGRHHCRFCGGIFCRNCSKGR 213
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WVP +E S+C C+ F +RH+C CG V C CSS++
Sbjct: 635 WVPGSEHSLCAGCRNP-FNFRRKRHNCYNCGLVFCKVCSSRK 675
>At1g29800.1 68414.m03643 zinc finger (FYVE type) family protein
contains Pfam domain PF01363: FYVE zinc finger
Length = 433
Score = 44.8 bits (101), Expect = 5e-05
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCS 641
W+P + S CM C ++ RHHCR CG + C CS
Sbjct: 105 WLPDSAASACMLCSVRFHPIMCSRHHCRYCGGIFCRDCS 143
>At3g23270.1 68416.m02933 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1); similar to
zinc finger protein (GI:15811367) [Arabidopsis
thaliana]; similar to chromosome condensation regulator
protein (GI:22770461) [Cicer arietinum]
Length = 1045
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WV + SIC C++ F +RH+C CG V C CSSK+
Sbjct: 596 WVSGADQSICSGCRQA-FGFTRKRHNCYNCGLVHCHACSSKK 636
>At5g42140.1 68418.m05130 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1073
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WV E S C C++ F +RH+C CG V C CSSK+
Sbjct: 618 WVSGTEQSQCSACRQA-FGFTRKRHNCYNCGLVHCHSCSSKK 658
>At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator of
chromosome condensation (RCC1) family protein identical
to zinc finger protein PRAF1 [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.
Length = 1103
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
WV E S C C+ F +RH+C CG V C CSSK+
Sbjct: 629 WVSGAEQSQCSTCRLA-FGFTRKRHNCYNCGLVHCHSCSSKK 669
>At5g12350.1 68418.m01453 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1062
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
W + S+C C++ F+ +RH+C CG V C C+SK+
Sbjct: 640 WASGMDQSMCSGCRQP-FSFKRKRHNCYNCGLVFCHSCTSKK 680
>At1g65920.1 68414.m07480 regulator of chromosome condensation
(RCC1) family protein / zinc finger protein-related
contains Pfam profiles: regulator of chromosome
condensation (RCC1), PF01363 FYVE zinc finger
Length = 1006
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 528 VPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
+ N+ + C CK F R+H+C CG + C CSSK+
Sbjct: 636 ISLNDQTACSSCKSA-FGFTRRKHNCYNCGLLFCNACSSKK 675
>At5g19420.1 68418.m02314 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1124
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 525 WVPXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
W + S+C C++ F +RH+C CG V C CS+K+
Sbjct: 676 WASGMDQSMCSGCRQP-FNFKRKRHNCYNCGLVFCHSCSNKK 716
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar
to disease resistance protein RPP1-WsB (GI:3860165)
[Arabidopsis thaliana]
Length = 1996
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 540 EXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
+ S+C C++ F +RH+C CG V C CSSK+
Sbjct: 1537 DQSVCSGCRQA-FGFTRKRHNCYNCGLVHCHACSSKK 1572
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 552 CMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKR 650
C C+ F + + H+C CGSV C C+SK+
Sbjct: 642 CSGCRHP-FNYMRKLHNCYNCGSVFCNSCTSKK 673
>At3g02160.1 68416.m00188 hypothetical protein
Length = 397
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 492 GKQPPSEHAAVWVP-XNEXSICMHCKKTQFTVINRRHHCRKCGS 620
G +PP EH VW+P E +C ++T I ++ GS
Sbjct: 185 GAEPPDEHIPVWLPAFPETELCDRSEETNAATIEGEIPSKENGS 228
>At2g19650.1 68415.m02296 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 489 SGKQPPSEHAAVWVPXNEXSICMHCKKTQFTVINRR-HHCRKCGSVVCGPC 638
S Q P + VP C+ C++ +F I+R+ HHC C +C C
Sbjct: 208 SHPQHPLKSLRYEVPGYADKKCLLCRE-EFDGIHRQLHHCGVCNFSICRSC 257
>At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529 DHHC zinc finger domain
Length = 345
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 537 NEXSICMHCKKTQFTVINRRHHCRKCGSVV 626
N + C +C K + R HHCR CG V
Sbjct: 145 NNYTFCNYCSKPKSP---RTHHCRTCGMCV 171
>At1g18440.1 68414.m02301 peptidyl-tRNA hydrolase family protein
contains Pfam profile PF01195: peptidyl-tRNA hydrolase
Length = 288
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 215 NFCQDTFTKQGPALALLEVVPSCRSSSPPLQ 123
+F ++F+ Q P LL+ +PS + SPPLQ
Sbjct: 63 SFSSNSFSSQ-PESELLQALPSSKPKSPPLQ 92
>At4g10680.1 68417.m01745 transcription factor IIB (TFIIB) family
protein contains Pfam profile: PF00382 transcription
factor TFIIB repeat
Length = 182
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 540 EXSICMHCKKTQFTVINRRHH---CRKCGSVV 626
E IC+ CK+ TV+N ++ C +CG V+
Sbjct: 3 EDGICLECKRPTETVVNYKNGDTICIECGHVI 34
>At1g45243.1 68414.m05188 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 263
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 531 PXNEXSICMHCKKTQFTVINRRHHCRKCGSVVCGPCSS 644
P + IC CK + N +C +C +C C S
Sbjct: 105 PGEQRRICSICKDFNYCRTNETFNCLECDFSLCFECVS 142
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,228,561
Number of Sequences: 28952
Number of extensions: 282693
Number of successful extensions: 645
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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