Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G08
         (467 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.)              229   7e-61
SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.1  
SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82)          30   1.1  
SB_58212| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-38)                 29   1.5  
SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  

>SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 224

 Score =  229 bits (561), Expect = 7e-61
 Identities = 103/147 (70%), Positives = 121/147 (82%)
 Frame = +1

Query: 25  RVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAV 204
           +V + +L+LQKRLAAS+++CGKKK+WLDPNE NEIAN NSRQN+RK+IKDGL+IKKP  V
Sbjct: 26  KVHVGTLRLQKRLAASLLKCGKKKIWLDPNECNEIANANSRQNVRKLIKDGLIIKKPEIV 85

Query: 205 HSRARVRKNTEARRKGRHCGFGKRRGTANARMPQXELWVQRQRVXXXXXXXYXTAKXIDR 384
           HSRARVRK  EAR KGRH G GKR+GTANARMPQ  +W++R RV       Y  AK ID 
Sbjct: 86  HSRARVRKADEARSKGRHSGHGKRKGTANARMPQKTIWIRRMRVLRRLLRKYREAKKIDN 145

Query: 385 HLYHSLYMKAKGNVFXNKRVLMEYIHR 465
           H+YHSLYMK+KGNVF NKRVLMEYIH+
Sbjct: 146 HMYHSLYMKSKGNVFKNKRVLMEYIHK 172


>SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 172

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 340 LEPFVFVPIVXSVAY--AHWQYLFSYQSHSDDPFYVPLCFCGH 218
           ++ + F+P    V +    W++  ++  H+DDPF V    C H
Sbjct: 72  IKDYSFLPCCFKVCHRTCFWRWAHNHSIHADDPFEVACPHCRH 114


>SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82)
          Length = 646

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 340 LEPFVFVPIVXSVAY--AHWQYLFSYQSHSDDPFYVPLCFCGH 218
           ++ + F+P    V +    W++  ++  H+DDPF V    C H
Sbjct: 72  IKDYSFLPCCFKVCHRTCFWRWAHNHSIHADDPFEVACPHCRH 114


>SB_58212| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-38)
          Length = 352

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
 Frame = -3

Query: 300 HTRIGSTSSLTKATVTTLST----CLCVFADTGAGVDCYRFLDDETILDHLTD-VLSGVG 136
           +T +G  S+    T+T LS     CL +    G        +  +  L   T+ +L+ + 
Sbjct: 5   NTSVGYNSTSAGFTITDLSLLPAYCLAISVGLGGNGLVIGVVRKKRSLHTTTNYLLANLA 64

Query: 135 VCDLIDFIWIQPHLLFT-TSHNRG 67
           + DL++ IW  P L+ T   H RG
Sbjct: 65  LADLLNLIWCIPGLVLTFVEHPRG 88


>SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 211 RARVRKNTEARRKGRHCGFGKRRGTANAR 297
           +A  RK    RR+ R  G  K+R TANAR
Sbjct: 17  KANSRKKRRRRRRPRLTGLSKQRQTANAR 45


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,644,723
Number of Sequences: 59808
Number of extensions: 328550
Number of successful extensions: 810
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 969807871
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)