Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_E15
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 204 6e-53
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 144 5e-35
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 134 7e-32
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 5e-30
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 6e-29
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 121 5e-28
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 120 1e-27
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 120 1e-27
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 118 4e-27
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 117 7e-27
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 3e-26
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 110 1e-24
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 107 5e-24
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 99 1e-21
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 99 3e-21
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 96 2e-20
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 96 2e-20
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 89 3e-18
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 88 5e-18
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 83 2e-16
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 83 2e-16
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 77 1e-14
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 76 2e-14
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 73 1e-13
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 71 8e-13
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 69 4e-12
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 65 5e-11
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 64 9e-11
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 59 2e-09
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 59 3e-09
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 44 4e-09
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 57 1e-08
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 56 2e-08
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 53 2e-07
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 53 2e-07
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 50 2e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 49 4e-06
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 49 4e-06
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 48 8e-06
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 47 1e-05
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 46 2e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 45 4e-05
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 44 1e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 43 2e-04
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 42 3e-04
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 42 3e-04
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 42 4e-04
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 41 0.001
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 40 0.002
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 40 0.002
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 39 0.004
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 38 0.009
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 38 0.009
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 36 0.020
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 36 0.020
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 35 0.046
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 33 0.19
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 32 0.33
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 32 0.43
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 32 0.43
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 31 0.57
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.75
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 1.00
SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 29 2.3
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 29 3.0
SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08) 29 3.0
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 29 3.0
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 28 7.0
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 27 9.3
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 27 9.3
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 204 bits (497), Expect = 6e-53
Identities = 94/121 (77%), Positives = 109/121 (90%)
Frame = +1
Query: 256 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQ 435
R D YDYL+K+VLIGDSGVGKSSLLSRFTRNEF++ESKSTIGVEFATRSI V+GK IKAQ
Sbjct: 5 RYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQ 64
Query: 436 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVG 615
+WDTAGQERYRAITSAYYRGAVGA+LVYD+ K ++ +V RWL E+R+HAD I++MLVG
Sbjct: 65 VWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVG 124
Query: 616 N 618
N
Sbjct: 125 N 125
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 144 bits (349), Expect = 5e-35
Identities = 66/118 (55%), Positives = 90/118 (76%)
Frame = +1
Query: 265 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWD 444
EYDYLFK++LIGDSGVGKSSLL RF + F+ STIGV+F R++ VDGKTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWD 63
Query: 445 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
TAGQER+R +T+AYYR A G +L+YD+ + ++ ++ +WL E+ ++A + +LVGN
Sbjct: 64 TAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGN 121
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 134 bits (323), Expect = 7e-32
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +1
Query: 247 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTI 426
MGT++DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI VDGKTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 427 KAQIWDT 447
KAQIWDT
Sbjct: 61 KAQIWDT 67
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 129 bits (312), Expect = 2e-30
Identities = 72/139 (51%), Positives = 92/139 (66%), Gaps = 21/139 (15%)
Frame = +1
Query: 265 EYDYLFKVVLIGDSGVGKSSLLSRFT--------------------RNEFNLESK-STIG 381
EYDYLFK++LIGDSGVGKS LL RF +++ ES STIG
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIG 63
Query: 382 VEFATRSIXVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRW 561
V+F R+I +DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ S+ NV +W
Sbjct: 64 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 123
Query: 562 LRELRDHADXNILIMLVGN 618
L+E+ +A N+ +LVGN
Sbjct: 124 LQEIDRYACENVNKLLVGN 142
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 128 bits (308), Expect = 5e-30
Identities = 53/119 (44%), Positives = 82/119 (68%)
Frame = +1
Query: 262 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIW 441
D+Y YLFK++L+GD+ VGK+ L+ +FT+ F TIGV+F +++ VDG+ +K QIW
Sbjct: 2 DDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIW 61
Query: 442 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
DTAGQER+R+IT +YY A G ++ YDI S+ ++ +WL + + ++LI +VGN
Sbjct: 62 DTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGN 120
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 124 bits (299), Expect = 6e-29
Identities = 55/124 (44%), Positives = 82/124 (66%)
Frame = +1
Query: 247 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTI 426
M +D Y FKV+++GD GVGK+SL+ RFT+ F S ST+GV+ TR + + G +
Sbjct: 1 MKENDDNCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRV 60
Query: 427 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIM 606
K Q WDTAGQE++R IT +YYR A +LV+DI ++ ++ +WL ++ + + NIL +
Sbjct: 61 KLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKV 120
Query: 607 LVGN 618
LVGN
Sbjct: 121 LVGN 124
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 121 bits (291), Expect = 5e-28
Identities = 54/113 (47%), Positives = 78/113 (69%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
RY ++ YYRGA A++VYDI ++ W++EL+ A NI+I L GN
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGN 134
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 120 bits (289), Expect = 1e-27
Identities = 54/117 (46%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Frame = +1
Query: 271 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTA 450
DY+FKV+++GD VGKSSL+ RF +EFN + +TIGV+F +DGK +K Q+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 451 GQERYRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVGN 618
G+E+YRA++ +++RGA GALLV+D++ S+ ++ WL E + + + +LVGN
Sbjct: 68 GEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGN 124
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 120 bits (289), Expect = 1e-27
Identities = 58/120 (48%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Frame = +1
Query: 265 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKT-IKAQIW 441
+Y Y F+++LIGDS VGKSSLL +FT +F S T+GV+F R + + G IK QIW
Sbjct: 9 KYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIW 68
Query: 442 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHA-DXNILIMLVGN 618
DTAGQER+R+IT +YYR VG L++YDI S+ NV W +E + + ++ MLVG+
Sbjct: 69 DTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGH 128
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 118 bits (284), Expect = 4e-27
Identities = 56/134 (41%), Positives = 85/134 (63%)
Frame = +1
Query: 217 RRLKSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFAT 396
R +K S TR + +FKVV IGDSGVGKSS L RF +++ +TIGV+F
Sbjct: 876 RIVKESASQASPTRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQI 935
Query: 397 RSIXVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELR 576
+++ V+G+ I Q+WDTAGQER+R+IT Y+R A G L+ YD+ S+ N+ +W+ +
Sbjct: 936 KTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVE 995
Query: 577 DHADXNILIMLVGN 618
+ A+ + M++GN
Sbjct: 996 EGAEEGVAKMVLGN 1009
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 117 bits (282), Expect = 7e-27
Identities = 52/114 (45%), Positives = 75/114 (65%)
Frame = +1
Query: 277 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQ 456
+FK+VL GD+ VGKSS + R RN F+ ST+GV+F +++ VDGKT Q+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 457 ERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
ER+R+I +Y+R A G LL+YD+ S+ +V W+ + + + IML GN
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGN 555
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 115 bits (277), Expect = 3e-26
Identities = 53/113 (46%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K++++G+SGVGKSSLL RFT + F+ + +TIGV+F +++ V+G K IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHA-DXNILIMLVGN 618
+R +T +YYRGA G +LVYD ++ + WL E+ ++ +I+ MLVGN
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGN 122
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 110 bits (264), Expect = 1e-24
Identities = 47/98 (47%), Positives = 70/98 (71%)
Frame = +1
Query: 259 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQI 438
+ +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ + K +K QI
Sbjct: 15 DQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQI 74
Query: 439 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNV 552
WDTAGQERYR IT+AYYRGA+G +L+YDI S+ V
Sbjct: 75 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAV 112
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 109 bits (261), Expect = 2e-24
Identities = 47/112 (41%), Positives = 75/112 (66%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+V +GD GVGKSSL RF + F + + TIG++F T+++ +D ++ QIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
+R + +Y R + AL+V+DI + S+ +V W++ +RD +I++VGN
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGN 276
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 108 bits (259), Expect = 4e-24
Identities = 47/64 (73%), Positives = 59/64 (92%)
Frame = +1
Query: 259 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQI 438
ED YDYLFK+VLIGDSGVGKS+LLSR+T+NEF+L SK+TIGVE A R++ ++GKT++AQI
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQI 71
Query: 439 WDTA 450
WDTA
Sbjct: 72 WDTA 75
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 107 bits (258), Expect = 5e-24
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +1
Query: 361 ESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLS 540
+S TIGVEF ++ + V GK++K QIWDTAGQER+R++T +YYRGA GALLVYDI+ +
Sbjct: 123 DSSHTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRET 182
Query: 541 YXNVXRWLRELRDHADXNILIMLVGN 618
+ ++ WL + R A NI+I+LVGN
Sbjct: 183 FNSLTNWLTDARTLASPNIVIILVGN 208
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 99 bits (238), Expect = 1e-21
Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 11/116 (9%)
Frame = +1
Query: 271 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI-----------XVDG 417
++L K + +GDSGVGK+SLL ++T + FN TIG++F + + G
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRG 163
Query: 418 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHA 585
+ I Q+WDTAGQER+R++T+A++R A+G LLV+D+ S+ N+ WL +L+ HA
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 99.1 bits (236), Expect = 3e-21
Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Frame = +1
Query: 292 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQERYRA 471
L D GVGKSSL++RF +F+ +S TIGVEF + + +DG++ QIWDTAGQER+++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 472 ITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHAD----XNILIMLVGN 618
+ + +YRG+ LLVY + S+ N+ W +E +AD N +L+GN
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGN 328
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/83 (51%), Positives = 61/83 (73%)
Frame = +1
Query: 370 STIGVEFATRSIXVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXN 549
+TIGV+F R+I +DG+ +K QIWDTAGQER+R ITS YYRG G ++VYD+ ++ N
Sbjct: 8 TTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVN 67
Query: 550 VXRWLRELRDHADXNILIMLVGN 618
V RWL E+ + D +++ +LVGN
Sbjct: 68 VKRWLHEIDQNCD-DVIRILVGN 89
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 97.5 bits (232), Expect = 8e-21
Identities = 45/115 (39%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
FK+++IGDS VGK+ L R +F +++TIGV+F +S+ ++G+ +K Q+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 460 RYR-AITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHA-DXNILIMLVGN 618
R+R ++ YYR + +YDI + S+ + W+ E R HA ++ +L+GN
Sbjct: 107 RFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGN 161
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Frame = +1
Query: 253 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLES-KSTIGV-EFATRSIXVDGKTI 426
+R+ +DY FK ++IG+SGVGKS L+++ F+L+ ST+ + + D K I
Sbjct: 342 SRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKI 401
Query: 427 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRW--LRELRDHADXNIL 600
K I DTAGQERY +I AY+RG G LV+DI +++ + RW L AD NI
Sbjct: 402 KLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQ 461
Query: 601 IMLVGN 618
++LVGN
Sbjct: 462 LILVGN 467
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 95.9 bits (228), Expect = 2e-20
Identities = 39/68 (57%), Positives = 53/68 (77%)
Frame = +1
Query: 415 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXN 594
GK IK QIWDTAGQER+ IT+AYYRGA+G +LVYD+ S+ N+ +WL+++ DHA+ +
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 595 ILIMLVGN 618
+ MLVGN
Sbjct: 62 VKRMLVGN 69
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/114 (36%), Positives = 68/114 (59%)
Frame = +1
Query: 277 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQ 456
LFKVVL+G++GVGK+SL R N F ++TIG++ ++ + + K + +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 457 ERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
ER+R +T YYRGA +L++++ S + W+ + D + L +LV N
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHD-TDEFCPDALKVLVAN 123
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +1
Query: 484 YYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
YYRGAVGALLVYDIAKHL+Y NV RWL+ELRDHAD NI+IMLVGN
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 46
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +1
Query: 454 QERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
QERYRAITSAYYRGA+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GN
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGN 56
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 83.0 bits (196), Expect = 2e-16
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Frame = +1
Query: 262 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIX-VDGKTIKAQI 438
++Y FKV+++GD GK S + R+ N ++ K TIGV+FA ++I TI+ QI
Sbjct: 13 NQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQI 72
Query: 439 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLREL----RDHADXNILIM 606
W AGQER+ ++T YY+GA ++++D+ + + +W ++L + H+ + +
Sbjct: 73 WLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCI 132
Query: 607 LVGN 618
LVGN
Sbjct: 133 LVGN 136
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +1
Query: 454 QERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
QERYRAITSAYYRGA+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GN
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGN 56
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/108 (34%), Positives = 58/108 (53%)
Frame = +1
Query: 295 IGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQERYRAI 474
+GD G GK++ + R EF + +T+GVE IK +WDTAGQE++ +
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 475 TSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
YY A++++D+ ++Y NV W R+L + NI I+L GN
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGN 144
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +1
Query: 424 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILI 603
+K QIWDTAGQER+R IT +YYR G ++ YDI K ++ NV RW +++ +A N +
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIK 154
Query: 604 MLVGN 618
+LVGN
Sbjct: 155 LLVGN 159
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +1
Query: 439 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
W+ AGQER+R ITS+YYRGA G ++VYDI K SY N+ +WL E+ +A + ++LVGN
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGN 432
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 71.3 bits (167), Expect = 6e-13
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+V++GD GVGKS+ L T N F E T+ +++ +I +DGK +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSS-NIMLDGKAYNVGLWDTAGQED 65
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVGN 618
Y + Y L+ +DI S+ N+ +WL EL H I LVGN
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKI-LVGN 117
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +1
Query: 409 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHAD 588
V+ K K IWDTAGQER++++ YYR A A+LVYDI ++ ++ W+REL+ +
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGP 63
Query: 589 XNILIMLVGN 618
+I+I + GN
Sbjct: 64 QDIVIAVAGN 73
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/111 (32%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +1
Query: 286 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQERY 465
V+L+GDS GK++LL+ + RN+FN + ++T+ +T ++ VDG+ I+ +WDT+G E Y
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLST-AVEVDGERIELTLWDTSGHEDY 293
Query: 466 RAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVG 615
+ Y L+ +DI++ + ++ +W+ E+ D N ++LVG
Sbjct: 294 DHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCP-NKPVLLVG 343
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 64.9 bits (151), Expect = 5e-11
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
+KVV++G GVGKS+L +F +F + TI +F + I VD +I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRE-LRDHADXNILIMLVGN 618
++ ++ Y + G LLVY + ++ ++ + LR N+ I+LVGN
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGN 116
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +1
Query: 247 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTI 426
M + + D +K+V++G GVGKS+L +F ++ F + TI + + + +D +
Sbjct: 1 MAREQKDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVA 59
Query: 427 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIM 606
I DTAGQE + A+ Y R G LLV+ + S+ + ++ ++ D M
Sbjct: 60 HLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPM 119
Query: 607 LV-GN 618
++ GN
Sbjct: 120 IICGN 124
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+V++GD GK+ LL F++++F T+ + I VDGK ++ +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 5989
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVGN 618
Y + Y L+ + I S N+ +W E++ H N+ I+LVGN
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGN 6041
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG--VE---FATRSIXVDGKTIKAQIWDT 447
++ ++GDSGVGK+SL+ E + TIG VE + + GKT + WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 448 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLREL 573
G + S +Y G G +LV+D+ S+ N+ +WL E+
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +1
Query: 271 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTA 450
D+++++ L+GD GVGK++LL RF + F E TI ++ +SI +D T+ +I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILDTA 61
Query: 451 GQ-ERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNI 597
+ + + + R G ++VY A ++ N+ R+ ++ D N+
Sbjct: 62 SRGQNSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNL 111
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 58.8 bits (136), Expect = 3e-09
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 18/140 (12%)
Frame = +1
Query: 247 MGTREDEY---------DYLFKVVLIGD-SGVGKSS-LLSRFTRNE-FNLESKSTIGVEF 390
MG R++EY D+ FK++ +GD +G GK LS + N + K TIGV+F
Sbjct: 31 MGNRDEEYYSKLKSRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDF 90
Query: 391 ATRSIX---VDGK---TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNV 552
I D K T+K Q WD A ER+ +T+ Y R GAL+ + +
Sbjct: 91 YVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSA 150
Query: 553 XRWLRELRDHADXNILIMLV 612
+W ++++ ++ ++LV
Sbjct: 151 LKWSEKVKEANSGSVPMVLV 170
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 44.4 bits (100), Expect(2) = 4e-09
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +1
Query: 253 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 378
T + +YLFKV++IGD GVGK+SL+ R+ F++ ++T+
Sbjct: 663 TAGERREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
Score = 33.9 bits (74), Expect(2) = 4e-09
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 463 YRAITS---AYYRGAVGALLVYDIAKHLSYXNVXRWLREL 573
YRA S YY+ AVGA +V+D+ + ++ V +W +L
Sbjct: 700 YRATVSFNIVYYKEAVGAFIVFDVTRASTFSAVQKWKNDL 739
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 271 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA-TRSIXVDGKTIKAQIWDT 447
D ++K+ L G GVGK+S+ +R + +EF E +S ++ + + K +K +WDT
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDT 65
Query: 448 AGQERYRAITSAYYRGAVGALLVYDI 525
G E Y ++T +Y + L+VY +
Sbjct: 66 LGMEEYESLTRNHYSNSKVVLVVYSL 91
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +1
Query: 271 DYL-FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDT 447
DY+ K+ ++GD VGK++L N F E T VDG +A ++D+
Sbjct: 3 DYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDS 62
Query: 448 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVX-RWLRELRDHADXNILIMLVGN 618
AG E + + Y L+ +DIA S+ NV RWL EL DH + +LVGN
Sbjct: 63 AGGEDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPEL-DHFSPGVPRVLVGN 119
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
KVVL GD+ VGK+S L T+NE LE T + + V + +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNE--LEGTPTAFANYEL-GLEVGSQKFLLDLWDTEGTTE 64
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVGN 618
Y + Y+G+ LL +DI+ ++ + +WL E +I + L+GN
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRV-LIGN 116
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDH 582
Y + Y L+ + + S+ NV +W+ E+ H
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH 104
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR--SIXVDGKTIKAQIWDTAGQ 456
K V++GD GVGK+SLL + + F S + F T ++ V+ K + DTAGQ
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGF---PNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQ 76
Query: 457 ERYRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVG 615
E + A+ Y A ++ + + S+ NV +W+ E+R+ I+LVG
Sbjct: 77 EDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREF-QPKAPIILVG 129
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 277 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKA--QIWDTA 450
+F+VV++G GVGK+SL+ RF F+ + T+G + +S+ + K A +I DTA
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTL-SKDFNAFLEIMDTA 164
Query: 451 GQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
G + A+ + A +LVY + + S RE+ + ++LVGN
Sbjct: 165 GSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGN 220
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +1
Query: 265 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWD 444
E D KVV +GD VGK+S L T + F ++I + ++++ +DGK + D
Sbjct: 5 ELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCD 63
Query: 445 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDHADXNILIMLVGN 618
T G R +++ A LL +DIA S+ N+ WL + + ++ +LVGN
Sbjct: 64 TPGTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHV-NLETSDVPKVLVGN 121
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 268 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 378
YDYLFK++LIGDSGVGK+ +L RF+ + FN STI
Sbjct: 6 YDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
Score = 44.8 bits (101), Expect = 6e-05
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +1
Query: 496 AVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
A G +LVYDI + ++ N+ +WLR + +HA+ ++ M++GN
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGN 165
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
K+ ++G VGKSSL +F +F TI F T++I G+ ++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAGQDE 66
Query: 463 YRAITSAYYRGAVGALLVYDI 525
Y +Y G G +LVY +
Sbjct: 67 YSIFPQSYSMGIHGYILVYAV 87
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +1
Query: 436 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRE 570
IWDTAGQER++++ A+YRGA +LV+D+ + S+ + W E
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDE 45
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 415 GKTIKAQIWDTAGQERY-----RAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRD 579
GKT+ I DT G+ R + YR GA++V+D+ S+ V WL ++++
Sbjct: 14 GKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLDKVQE 73
Query: 580 HADXNILIMLVGN 618
H I ++LVGN
Sbjct: 74 HCGHEIPVVLVGN 86
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/107 (28%), Positives = 48/107 (44%)
Frame = +1
Query: 292 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQERYRA 471
+IG GK+++L R E + + T+G T V K I +WD GQ++ RA
Sbjct: 1 MIGLDNAGKTTILYRLKLEEV-VSTVPTLGFNVET----VTYKNISFTVWDIGGQDKIRA 55
Query: 472 ITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLV 612
+ YY+G G + V D A L +L + +I+LV
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLV 102
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 442 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVG 615
DTAG+E+Y ++S Y RGA A++ YDI K S + L A+ N L+++VG
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVG 335
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
F +V G S VGK+SL+ RF FN + TI +F + + + +T + QI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLREL 573
+ A+ +LVY S+ + R+ E+
Sbjct: 88 EFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEI 125
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/113 (26%), Positives = 52/113 (46%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
+ +VL+G +GVGKS+LL RF F E T+ + + S +D I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDV-SATIDEDPATLHITDTA--S 184
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
Y + + G + + ++ + + + +RE++ LI+L GN
Sbjct: 185 TYEPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGN 237
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = +1
Query: 256 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQ 435
RE++ + KVV++G+ VGKSS++ +G+ I+
Sbjct: 2 REEDVEVAIKVVVVGNGAVGKSSMIQ------------------------SANGEDIRLM 37
Query: 436 IWDTAGQERYRAITSAYYR 492
+WDTAGQE + AIT AYYR
Sbjct: 38 LWDTAGQEEFDAITKAYYR 56
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/94 (30%), Positives = 44/94 (46%)
Frame = +1
Query: 277 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQ 456
+ KVV+IG+ GVGKS+L RF F E T+ + + V G+ + ++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAIELTDTAGE 919
Query: 457 ERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXR 558
+ G V +L Y I S+ R
Sbjct: 920 NSPAKLERCLEIGEVFVVL-YSITSRHSFDEASR 952
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
+KVV++G GVGKS+L +F +F + TI + TAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-----------------EDFYHTAGTE 46
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRE-LRDHADXNILIMLVGN 618
++ ++ Y + G LLVY + ++ ++ + LR N+ I+LVGN
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGN 100
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
++ L+G GK++ ++ +F+ + T+G F R + TIK +WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGNVTIK--VWDIGGQPR 77
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHAD-XNILIMLVGN 618
+R++ Y RG + + D A H L L + I I+++GN
Sbjct: 78 FRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGN 130
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
++V++G GK+++L + E + + TIG T K + IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKE-TVSTIPTIGFNVETLQPT---KNVTLTIWDVGGQDK 76
Query: 463 YRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHAD-XNILIMLVGN 618
R + Y++G G L V D + L L + D + ++ +++V N
Sbjct: 77 IRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVAN 129
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 379 GVEFATRSIXVDGKT-IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVX 555
GV S GK K I DTAGQE Y A+ Y R G L V+ + S+ ++
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDIN 320
Query: 556 RWLRELRDHADX-NILIMLVGN 618
++ +++ D + ++LVGN
Sbjct: 321 QYREQIKRVKDAEEVPMVLVGN 342
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRF-TRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQ 456
+KVVL+GD+GVGKS ++ R + +E S+ S + + DT+G
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTASNSCHLYLLDTSGL 73
Query: 457 ERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRD 579
E YR +T Y + + + + S ++ +W + D
Sbjct: 74 EEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLD 114
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 41.9 bits (94), Expect = 4e-04
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Frame = +1
Query: 277 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQ 456
+F++ ++G GVGKSS+ R+ +NEF I GK ++ DTAGQ
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTAGQ 2643
Query: 457 ERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRE--LRDHADXN----ILIMLVGN 618
E Y + + L+++ I S+ N + LR +R+H + N I +++VGN
Sbjct: 2644 EEYTSFRDSSLATGDAFLVLFAINSASSW-NELKDLRGKIIREHEESNTTCTIPMVIVGN 2702
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 418 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXN- 594
K I +WD GQ++ R + Y++GA G + V D A V L + H++ N
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNG 211
Query: 595 ILIMLVGN 618
+ +++V N
Sbjct: 212 VPVVVVAN 219
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +1
Query: 499 VGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
+G LLVYDI S+ ++ +WL+ + D+A N+ +L+GN
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGN 42
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+++++G GK+++L + E + + TIG T V+ K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGGQDK 73
Query: 463 YRAITSAYYRGAVGALLVYD 522
R + Y++ G + V D
Sbjct: 74 IRPLWRHYFQNTQGLIFVVD 93
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/98 (24%), Positives = 46/98 (46%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
+K+ ++G GVGK+SLL F ++F+ + T+ ++ S+ +DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 460 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVXRWLREL 573
+ + ++V+ I S+ + E+
Sbjct: 72 AFPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEI 109
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 271 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 381
DYL KV+LIGDS VGK+ LL F E ++ T G
Sbjct: 10 DYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAG 46
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+++++G GK+++L + E + + TIG F S V+ K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVES--VEYKNISFTVWDVGGQDK 73
Query: 463 YRAITSAYYRGAVGALLVYD 522
R + Y++ G + V D
Sbjct: 74 IRPLWRHYFQNTQGLIYVVD 93
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 271 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 381
+ LFKV+++GD+ VGK+S + R+ E K TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+++++G GK+++L +E + + TIG V+ K IK +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV----VEYKNIKFTVWDIGGQDK 146
Query: 463 YRAITSAYYRGAVGALLVYD 522
R + Y++ G + V D
Sbjct: 147 IRLLWRLYFQETQGLIFVVD 166
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 487 YRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
Y G +LVYDI S+ W+R + +HA ++ M++GN
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGN 125
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEF--NLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQ 456
K+VL+G+SG GK+S E + T+GV + DG ++ Q+ D AGQ
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAGQ 319
Query: 457 ERYR 468
RY+
Sbjct: 320 RRYQ 323
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 36.3 bits (80), Expect = 0.020
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 459
F VV++G GK+S+L R N+F + F +I K I+ ++WD G+E
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFREYVNTVPTTAFNVETIR-PFKGIRFKVWDIGGRE 77
Query: 460 RYRAITSAYYRGAVGALLVYD 522
+ R + AY R + V D
Sbjct: 78 QNRPLWKAYARQTDAVIYVVD 98
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 462
+++++G G GKS LS ++ + + +T F + DG + IW+ G E+
Sbjct: 168 RILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDG--LNLNIWEIGGDEK 225
Query: 463 YRA 471
YRA
Sbjct: 226 YRA 228
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 472 ITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELRDHADXNILIMLVGN 618
+++A R G LLVYDI S+ N+ WL +R + I+LVGN
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGN 96
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 34.7 bits (76), Expect = 0.061
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSR-------------FTRNEF--NLESKSTIGVEFAT----RSI 405
K+VL+GD+G+GKS+L+++ F F + E K T ++T
Sbjct: 7 KLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYSNPT 66
Query: 406 XVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNV-XRWLRELRDH 582
V +A I DT G + Y A +L +D+ S+ NV +W E+R +
Sbjct: 67 GVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLY 126
Query: 583 ADXNILIMLVG 615
+ + +MLVG
Sbjct: 127 -EKKVPLMLVG 136
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 34.7 bits (76), Expect = 0.061
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +1
Query: 274 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVD--GKTIKAQIWDT 447
Y K++L+G GK++L+ R + + +T G+ + D + +IWD
Sbjct: 550 YSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDF 609
Query: 448 AGQERYRAITSAYYRGAVGALLVYDIAK-HLSYXNVXRWLRELRDHADXNILIML 609
GQE Y A + +LV+++ + + WL + A + L+++
Sbjct: 610 GGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARAPGSSLVIV 664
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +1
Query: 220 RLKSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR 399
RLK + +MG+ D FK+ ++G S VGK+SL+ + F E TI ++
Sbjct: 170 RLKMTSNIQMGSGLPPVD--FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIH 226
Query: 400 SIXVDGKTIKAQIWDT 447
++ DG + DT
Sbjct: 227 ALNQDGVHYNVCLVDT 242
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 32.3 bits (70), Expect = 0.33
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +1
Query: 286 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTAGQERY 465
V ++G GVGKS+ R F E + + + S+ +DG+ + + DTAG+
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYK-HSMEIDGQYLALDVLDTAGKVSR 242
Query: 466 RAITSAYYRGAVGAL 510
A S + G L
Sbjct: 243 EARMSPRQKTKTGQL 257
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 32.3 bits (70), Expect = 0.33
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Frame = +1
Query: 274 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVD------------- 414
Y K++++G G GK++LL+ + ST+G+ S+ +
Sbjct: 665 YRMKLMVVGIQGYGKTTLLAALKGQPLP-SNLSTVGIVVDEWSVQISTSLLSRIGITSGI 723
Query: 415 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA-KHLSYXNVXRWLRELRDHADX 591
G TI WD AGQ Y A + + L V++ N+ WL ++ A
Sbjct: 724 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPY 783
Query: 592 NILIML 609
+ +I++
Sbjct: 784 SDVIII 789
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSR--FTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWD 444
++V++GDS VGK+ LL + + N + + +I + +I VDGK K ++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKLELCD 74
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 472 ITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELR 576
+ + +Y+ GALLVYD+ S+ + WL E++
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIK 40
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 409 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 522
V+ K I +WD GQ++ R + Y++ G + V D
Sbjct: 505 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 542
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 472 ITSAYYRGAVGALLVYDIAKHLSYXNVXRWLRELR 576
+ + +Y+ GALLVYD+ S+ + WL E++
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIK 35
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 436 IWDTAGQERYRAITSAYYRGAVGALLVYDI 525
+WDT G E Y ++T +Y + L+VY +
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSL 32
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/57 (22%), Positives = 32/57 (56%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQIWDTA 450
+K+ ++GD+ GK+SLL+ +++ +E + T+ E + ++ +WD++
Sbjct: 62 YKLSVVGDAESGKTSLLNALVKSD--IEVEETVIFEECVTDVTSGDSNLEFMLWDSS 116
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 381
+VV++G GVGKS+L R F E ST+G
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.7 bits (66), Expect = 1.00
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 381
+ +V++G +GVGK++L+ RF F E T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 367 KSTIGVEFATRSIXVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSY 543
K I S+ K +WD AGQ Y A ++ +L ++++K+L Y
Sbjct: 41 KRLIAQHLMDSSLSEKRKETVLDVWDFAGQHLYYATHPVFFSSRAVYVLTHNLSKNLGY 99
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +1
Query: 247 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTI 426
+G R Y + ++G+ VGKSSL+ F F E TI EF ++ + +
Sbjct: 17 LGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHLLYND--- 72
Query: 427 KAQIWDTAGQERYR 468
Q+W+ Q R
Sbjct: 73 --QLWEERLQAEIR 84
>SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Frame = +1
Query: 271 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKS----TIGVEFATRSIXVDGKTI---- 426
DY K++ IG G GK+S + NLE+++ G+ AT ++ +D +
Sbjct: 2 DY-HKLLFIGPVGAGKTSAIRALCDEHHNLETEAKASDITGLRKATTTVAMDYGCLTLSD 60
Query: 427 --KAQIWDTAGQERYR 468
Q++ T GQ R+R
Sbjct: 61 GEAVQLYGTPGQARFR 76
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 274 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIK 429
Y +++LIG GK+SL F+ + +ST G+E VD + ++
Sbjct: 360 YRGRIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR 411
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIKAQ 435
F ++++G+SG+GKS+L+ + + K E +++ ++ T++ +
Sbjct: 25 FTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETSTVEIE 76
>SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08)
Length = 340
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTI---KAQIWDTA 450
FKV+++G +GVGKS L++ E+ +E + + T ++ K I + +WD+
Sbjct: 61 FKVIVVGRTGVGKSHLVNTL-MGEYVVEEGQDL--DPCTSTVSKHEKRIGRTRVTVWDSP 117
Query: 451 G 453
G
Sbjct: 118 G 118
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 29.1 bits (62), Expect = 3.0
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRF------TRNEFNLESKSTIGV-EFATRSIXVDGKTIKAQIW 441
K+ ++GD+ VGK+ +L R+ ++ + + KS V E + D W
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTYW 69
Query: 442 DTAGQERYRAITSA-----YYRGAVGALLVYDIAKHLSYXNVXR-WLRELRDHADXNILI 603
DT R + + YR ++ +DI S+ NV W+ EL+ H +
Sbjct: 70 DTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELK-HYMPETPV 128
Query: 604 MLVGN 618
++VGN
Sbjct: 129 LVVGN 133
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 283 KVVLIGDSGVGKSSLLSRFTRNEFN 357
KVVL+G GK+SL+ R+ + FN
Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFN 53
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +1
Query: 367 KSTIGVEFATRSIXVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLS 540
K I S+ K +WD AGQ Y A ++ +L ++++K+L+
Sbjct: 453 KRLIAQHLRDSSLSEKRKETVLDVWDFAGQHLYYATHPVFFSSRAVYVLTHNLSKNLN 510
>SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 367 KSTIGVEF---ATRSIXVDGKTI-KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH 534
+ST GV V GK I + +W+ A + Y+RGA+G L +Y+ A +
Sbjct: 107 RSTFGVHLWLVVQEKPRVFGKVITRYWVWENAVTTKAVTHDGRYFRGAMGCLQIYNKALN 166
Query: 535 L 537
L
Sbjct: 167 L 167
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 274 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIXVDGKTIK 429
Y +++LIG GK+SL F+ ST G+E + VD +K
Sbjct: 358 YRGRIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 436 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLS 540
IWD AGQ Y A + LLVY++ K L+
Sbjct: 558 IWDFAGQHLYYASHPVFLSPRAVYLLVYNLKKDLN 592
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Frame = +1
Query: 280 FKVVLIGDSGVGKSSLLSR------FTRNEF-NLESK--STIGVEFATRSIXVDGKTIKA 432
F V+++G+SG+GKS+LL+ +T + + +++ K T+ V+ T + G ++
Sbjct: 25 FTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSIKEKLNKTVEVKPCTVELKEGGVRLRL 84
Query: 433 QIWDTAG 453
+ DT G
Sbjct: 85 TVVDTPG 91
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 277 LFKVVLIGDSGVGKSSLLSRFTRNEF 354
L+KVV G GVGK+SL R +F
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKF 52
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 538 SYXNVXRWLRELRDHADXNILIMLVGN 618
S+ +W+ ++R +++IMLVGN
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGN 39
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,224,766
Number of Sequences: 59808
Number of extensions: 295335
Number of successful extensions: 946
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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