Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_D18
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02180.1 68418.m00139 amino acid transporter family protein b... 50 1e-06
At5g23810.1 68418.m02795 amino acid transporter family protein s... 48 5e-06
At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical ... 44 9e-05
At1g10010.1 68414.m01129 amino acid permease, putative similar t... 42 3e-04
At3g54830.1 68416.m06074 amino acid transporter family protein b... 42 4e-04
At1g58360.1 68414.m06638 amino acid permease I (AAP1) identical ... 42 5e-04
At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5) ... 41 8e-04
At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP... 40 0.001
At5g49630.1 68418.m06141 amino acid permease 6 (AAP6) identical ... 40 0.001
At2g41190.1 68415.m05087 amino acid transporter family protein l... 40 0.001
At1g77380.1 68414.m09011 amino acid carrier, putative / amino ac... 40 0.002
At3g28960.1 68416.m03620 amino acid transporter family protein l... 39 0.003
At5g16740.1 68418.m01960 amino acid transporter family protein l... 38 0.004
At2g39130.1 68415.m04807 amino acid transporter family protein b... 38 0.004
At5g38820.1 68418.m04695 amino acid transporter family protein l... 37 0.013
At1g80510.1 68414.m09435 amino acid transporter family protein s... 36 0.024
At5g15240.1 68418.m01785 amino acid transporter family protein l... 36 0.031
At2g42005.1 68415.m05196 amino acid transporter family protein l... 35 0.054
At3g56200.1 68416.m06246 amino acid transporter family protein l... 34 0.095
At4g38250.1 68417.m05402 amino acid transporter family protein l... 33 0.22
At5g40780.2 68418.m04951 lysine and histidine specific transport... 32 0.29
At5g40780.1 68418.m04950 lysine and histidine specific transport... 32 0.29
At2g40420.1 68415.m04985 amino acid transporter family protein s... 32 0.29
At1g67640.1 68414.m07716 lysine and histidine specific transport... 32 0.38
At5g19500.1 68418.m02323 tryptophan/tyrosine permease family pro... 31 0.51
At1g24400.1 68414.m03076 lysine and histidine specific transport... 31 0.51
At5g65990.1 68418.m08308 amino acid transporter family protein s... 30 1.2
At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (D... 30 1.5
At4g35080.2 68417.m04981 high-affinity nickel-transport family p... 30 1.5
At4g35080.1 68417.m04980 high-affinity nickel-transport family p... 30 1.5
At3g11900.1 68416.m01459 amino acid transporter family protein l... 30 1.5
At1g48640.1 68414.m05444 lysine and histidine specific transport... 30 1.5
At1g61270.1 68414.m06905 lysine and histidine specific transport... 29 2.0
At3g01760.1 68416.m00114 lysine and histidine specific transport... 29 2.7
At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /... 29 3.6
At3g50370.1 68416.m05508 expressed protein 29 3.6
At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A... 28 4.7
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At2g45620.1 68415.m05672 nucleotidyltransferase family protein l... 28 6.2
At1g71680.1 68414.m08271 lysine and histidine specific transport... 28 6.2
At1g26210.1 68414.m03198 expressed protein similar to hypothetic... 28 6.2
At2g32740.1 68415.m04006 exostosin family protein contains Pfam ... 27 8.2
>At5g02180.1 68418.m00139 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 7/172 (4%)
Frame = +1
Query: 10 SCNSDLVSTASSTRQHNYLNMSKNGLXEPSGSQPTP-KETTPLITXXXXXXXXXXXXXXL 186
S + L S+ +Q ++ + + +P SQP P KE T L L
Sbjct: 94 SSSRRLASSFQKKQQSSFCDSLSSSSSKPLLSQPVPDKEETILPVNPQSQLKLSVTDLPL 153
Query: 187 ------SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCW 348
S Q+ + + G G++ +P A+ +GW+G+PI++ ++ ++G + C
Sbjct: 154 PEPNLCSFSQSVLNGTNVLCGLGLITMPYAIKESGWLGLPILLFFGVITCYTGVLMKRCL 213
Query: 349 TILEERNPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
E +P + + Y I G T ++S+ + V L+ A V Y++M
Sbjct: 214 ----ESSPGIQT-----YPDIGQAAFGITGRFIISILLYVELYAACVEYIIM 256
>At5g23810.1 68418.m02795 amino acid transporter family protein
similar to amino acid carrier [Ricinus communis]
GI:3293031; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 467
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +1
Query: 208 LIAGEMAGSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEERNPQLXS 384
+I G + G+GVL+L A GWI P +I V S L DC+ + N L
Sbjct: 37 IITG-VIGAGVLSLAWATAELGWIAGPAALIAFAGVTLLSAFLLSDCYRFPDPNNGPLRL 95
Query: 385 XXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
N Y+ LGK +V + + ++LFG + Y ++ A
Sbjct: 96 ---NSYSQAVKLYLGKKNEIVCGVVVYISLFGCGIAYTIVIA 134
>At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical to
amine acid permease AAP2 [Arabidopsis thaliana]
GI:510236
Length = 493
Score = 44.0 bits (99), Expect = 9e-05
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVP-IIILMCLVAAFSGKRLGDCWTILEE 363
+V S I + GSGVL+L A+ + GWI P +++L LV +S L DC+
Sbjct: 49 TVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVMLLFSLVTLYSSTLLSDCY----- 103
Query: 364 RNPQLXSXXRN-PYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
R S RN Y LG + + + LFG ++ Y + A+
Sbjct: 104 RTGDAVSGKRNYTYMDAVRSILGGFKFKICGLIQYLNLFGIAIGYTIAAS 153
>At1g10010.1 68414.m01129 amino acid permease, putative similar to
amino acid permease I GI:22641 from [Arabidopsis
thaliana]; GC splice site at position 1256 is predicted
from alignment and not confirmed experimentally
Length = 475
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRN-PY 402
GSGVL+L A+ + GW+ G +++ ++ ++ L DC+ R+P + RN Y
Sbjct: 45 GSGVLSLAWAIAQLGWVAGTTVLVAFAIITYYTSTLLADCY-----RSPDSITGTRNYNY 99
Query: 403 AIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
+ LG + +A V L G ++ Y + A+
Sbjct: 100 MGVVRSYLGGKKVQLCGVAQYVNLVGVTIGYTITAS 135
>At3g54830.1 68416.m06074 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 546
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/106 (24%), Positives = 51/106 (48%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 366
S GQ + + G G+L+ P A+ GW+G+ I+ ++ ++G L C +
Sbjct: 151 SFGQAVLNGVNVLCGVGILSTPYAVKEGGWLGLIILFAFGILCFYTGLLLRYCL----DS 206
Query: 367 NPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
+P + + Y I G T ++VS+ + + L+ SV Y+++
Sbjct: 207 HPDVQT-----YPDIGHAAFGSTGRILVSVILYMELYAMSVEYIIL 247
>At1g58360.1 68414.m06638 amino acid permease I (AAP1) identical to
amino acid permease I GI:22641 from [Arabidopsis
thaliana]
Length = 485
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRN-PY 402
GSGVL+L A+ + GWI G I+++ + F+ L DC+ R P + RN Y
Sbjct: 54 GSGVLSLAWAIAQLGWIAGTSILLIFSFITYFTSTMLADCY-----RAPDPVTGKRNYTY 108
Query: 403 AIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
+ LG + +A L G +V Y + A+
Sbjct: 109 MDVVRSYLGGRKVQLCGVAQYGNLIGVTVGYTITAS 144
>At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5)
nearly identical to amino acid permease (AAP5) GI:608673
from [Arabidopsis thaliana]
Length = 480
Score = 40.7 bits (91), Expect = 8e-04
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEE 363
+V S I + GSGVL+L A+ + GWIG P+ ++L V ++ L C+
Sbjct: 31 TVWTASAHIITAVIGSGVLSLAWAVAQIGWIGGPVAMLLFSFVTFYTSTLLCSCY----- 85
Query: 364 RNPQLXSXXRN-PYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
R+ + RN Y LG V + V LFG ++ Y + +A
Sbjct: 86 RSGDSVTGKRNYTYMDAIHSNLGGIKVKVCGVVQYVNLFGTAIGYTIASA 135
>At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP4)
identical to amino acid transporter GI:608671 from
[Arabidopsis thaliana];
Length = 466
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVP-IIILMCLVAAFSGKRLGDCWTILEE 363
+V S I + GSGVL+L A+ + GWI P +++L V +S L DC+
Sbjct: 22 TVWTASAHIITAVIGSGVLSLAWAIGQLGWIAGPTVMLLFSFVTYYSSTLLSDCY----- 76
Query: 364 RNPQLXSXXRN-PYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
R S RN Y LG + + + LFG +V Y + A+
Sbjct: 77 RTGDPVSGKRNYTYMDAVRSILGGFRFKICGLIQYLNLFGITVGYTIAAS 126
>At5g49630.1 68418.m06141 amino acid permease 6 (AAP6) identical to
amino acid permease 6 (AAP6) [Arabidopsis thaliana]
GI:1769887
Length = 481
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWIGVPIIIL-MCLVAAFSGKRLGDCWTILEERNPQLXSXXRN-PY 402
GSGVL+L A+ + GW+ P +++ + F+ L DC+ R+P + RN Y
Sbjct: 50 GSGVLSLAWAIAQLGWVAGPAVLMAFSFITYFTSTMLADCY-----RSPDPVTGKRNYTY 104
Query: 403 AIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
+ LG + +A L G ++ Y + A+
Sbjct: 105 MEVVRSYLGGRKVQLCGLAQYGNLIGITIGYTITAS 140
>At2g41190.1 68415.m05087 amino acid transporter family protein low
similarity to vesicular GABA transporter [Rattus
norvegicus] GI:2587061; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 536
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/106 (22%), Positives = 48/106 (45%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 366
SV QT MAG G+L+ P + GW + I++L ++ ++ + DC+ E
Sbjct: 148 SVIQTIFNAINVMAGVGLLSTPYTVKEAGWASMVILLLFAVICCYTATLMKDCF----EN 203
Query: 367 NPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
+ + Y I + GK +++ M + L+ V ++++
Sbjct: 204 KTGIIT-----YPDIGEAAFGKYGRILICMLLYTELYSYCVEFIIL 244
>At1g77380.1 68414.m09011 amino acid carrier, putative / amino acid
permease, putative strong similarity to amino acid
carrier GI:3293031 from [Ricinus communis]; contains
Pfam profile PF01490: Transmembrane amino acid
transporter protein; identical to cDNA AAP3 (Amino Acid
Permease) GI:3970651
Length = 476
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILM-CLVAAFSGKRLGDCWTILEE 363
SV S I + GSGVL+L A + GW+ P+++L+ V F+ L C+
Sbjct: 33 SVWTASAHIITAVIGSGVLSLAWATAQLGWLAGPVVMLLFSAVTYFTSSLLAACY----- 87
Query: 364 RNPQLXSXXRN-PYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
R+ S RN Y LG + + + +FG ++ Y + +A
Sbjct: 88 RSGDPISGKRNYTYMDAVRSNLGGVKVTLCGIVQYLNIFGVAIGYTIASA 137
>At3g28960.1 68416.m03620 amino acid transporter family protein low
similarity to vesicular inhibitory amino acid
transporter [Mus musculus] GI:2826776; contains
INTERPRO:IPR002422 amino acid/polyamine transporter,
family II
Length = 405
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/94 (21%), Positives = 51/94 (54%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPY 402
++G G+L++P +L R GW+ + +++L+ + A ++ + C +RN + Y
Sbjct: 29 LSGIGILSVPYSLARGGWLSLSLLLLLAVTAFYTSLLITKCMN--ADRNIK-------TY 79
Query: 403 AIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
I ++ G+ ++VS+ + + L+ + +L++
Sbjct: 80 PDIGERAFGRPGRIIVSVFMHLELYLVTTGFLIL 113
>At5g16740.1 68418.m01960 amino acid transporter family protein low
similarity to lysosomal amino acid transporter 1 [Rattus
norvegicus] GI:14571904; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 426
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/97 (25%), Positives = 47/97 (48%)
Frame = +1
Query: 211 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXX 390
+ G + G G L++P A+ GW+ + ++I ++ ++ LG C RNP+ S
Sbjct: 42 MVGMLIGLGQLSMPYAVESGGWMSIFLLISFGILTTYTSHILGKC----IRRNPKSKS-- 95
Query: 391 RNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLL 501
Y+ I G+ ++V + I + +F A V Y +
Sbjct: 96 ---YSDIGYSAFGRHGRLIVCLFIYLEIFMALVSYTI 129
>At2g39130.1 68415.m04807 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/106 (24%), Positives = 48/106 (45%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEER 366
S GQ + + G G+L+ P A GW+G+ I+ + L++ ++G L C L+
Sbjct: 161 SYGQAVLNGLNVLCGVGILSTPYAAKEGGWLGLMILFVYGLLSFYTGILLRYC---LDSE 217
Query: 367 NPQLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
+ Y I G T + VS+ + + L+ V Y+++
Sbjct: 218 S------DLETYPDIGQAAFGTTGRIFVSIVLYLELYACCVEYIIL 257
>At5g38820.1 68418.m04695 amino acid transporter family protein low
similarity to N system amino acids transporter NAT-1
[Mus musculus] GI:7406950; contains Pfam profile
PF01490: Transmembrane amino acid transporter protein
Length = 456
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +1
Query: 211 IAGEMAGSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSX 387
+A + G+G++ALP + G I G+ II+LM + S + L I +R+
Sbjct: 44 LATTIIGAGIMALPATMKILGLIPGITIIVLMAFLTDASIEFLLRFSNIGNQRS------ 97
Query: 388 XRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
Y + D + GK +++ ++I+V+ G +VY+++
Sbjct: 98 ----YGGVMDDSFGKCGRIMLQVSILVSNIGVLIVYMII 132
>At1g80510.1 68414.m09435 amino acid transporter family protein
similar to amino acid transporter system N2 [Rattus
norvegicus] GI:14578932; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 489
Score = 35.9 bits (79), Expect = 0.024
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +1
Query: 229 GSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPYA 405
G+G++ALP + G + G +IILM L++ S + L + + ++ Y
Sbjct: 90 GAGIMALPATMKVLGLVLGFVLIILMALLSEISVELLVRFSVLYKSKS----------YG 139
Query: 406 IIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
+ LGKT V+ + IIV G VVYL++
Sbjct: 140 EVVQFALGKTARVLSEICIIVNNGGVLVVYLII 172
>At5g15240.1 68418.m01785 amino acid transporter family protein low
similarity to amino acid transporter system A3 [Homo
sapiens] GI:13876616; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 423
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNPY 402
++G G+L++P AL GW+ + I+ + + + + C E +P L S Y
Sbjct: 46 LSGVGILSVPYALASGGWLSLIILFTVAITTFYCAILIKRCM----EMDPLLRS-----Y 96
Query: 403 AIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
I + G T V+VS+ + + L+ + +L++
Sbjct: 97 PDIGYKAFGNTGRVIVSIFMNLELYLVATSFLIL 130
>At2g42005.1 68415.m05196 amino acid transporter family protein low
similarity to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 413
Score = 34.7 bits (76), Expect = 0.054
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFS-GKRLGDCWTILEERNPQLXSXXRNP 399
+ G+GVL LP A RTGW LM L+ FS + C +L +L
Sbjct: 36 IVGAGVLGLPYAFKRTGW-------LMGLLTLFSVAALINHCMMLLVHIRRKLGVSNIGS 88
Query: 400 YAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLL 501
+ + G VV + II++ G V YL+
Sbjct: 89 FGDLGFAACGNLGRFVVDILIILSQAGFCVGYLI 122
>At3g56200.1 68416.m06246 amino acid transporter family protein low
similarity to N system amino acids transporter NAT-1
[Mus musculus] GI:7406950; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 435
Score = 33.9 bits (74), Expect = 0.095
Identities = 21/98 (21%), Positives = 47/98 (47%)
Frame = +1
Query: 211 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXX 390
++ + G+G++++P A G VP +++ ++A S +G +
Sbjct: 32 VSTSIIGAGIMSMPAAFKVLGI--VPAFLIITIIAWLSTISVGFLMK-------STLAGE 82
Query: 391 RNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
YA + ++ GKT S+ V +A +V FG +++ ++
Sbjct: 83 STTYAGVMKESFGKTGSIAVQIATMVATFGCMIIFSII 120
>At4g38250.1 68417.m05402 amino acid transporter family protein low
similarity to lysosomal amino acid transporter 1 [Rattus
norvegicus] GI:14571904; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 436
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWI-GVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNP 399
+ G+GVL LP A RTGW+ GV +++ + ++ L L+ N +
Sbjct: 47 VVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLDSFNAGISKI--GS 104
Query: 400 YAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLL 501
+ + G +VV + II++ G V YL+
Sbjct: 105 FGDLGFAVCGSLGRIVVDLFIILSQAGFCVGYLI 138
>At5g40780.2 68418.m04951 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 445
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNP 399
M G+GVL LP A+ + GW G+ +++L ++ ++ W ++ E + + +
Sbjct: 48 MVGAGVLGLPYAMSQLGWGPGIAVLVLSWVITLYT------LWQMV-EMHEMVPGKRFDR 100
Query: 400 YAIIADQTLGKTXS--VVVSMAIIVTLFGASVVYLL 501
Y + G+ +VV +IV + G +VY++
Sbjct: 101 YHELGQHAFGEKLGLYIVVPQQLIVEI-GVCIVYMV 135
>At5g40780.1 68418.m04950 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 446
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNP 399
M G+GVL LP A+ + GW G+ +++L ++ ++ W ++ E + + +
Sbjct: 49 MVGAGVLGLPYAMSQLGWGPGIAVLVLSWVITLYT------LWQMV-EMHEMVPGKRFDR 101
Query: 400 YAIIADQTLGKTXS--VVVSMAIIVTLFGASVVYLL 501
Y + G+ +VV +IV + G +VY++
Sbjct: 102 YHELGQHAFGEKLGLYIVVPQQLIVEI-GVCIVYMV 136
>At2g40420.1 68415.m04985 amino acid transporter family protein
similar to neuronal glutamine transporter [Rattus
norvegicus] GI:6978016; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 440
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/98 (22%), Positives = 50/98 (51%)
Frame = +1
Query: 211 IAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXX 390
I+ + G+G++A+P A G I P + ++ ++A S G L + + +
Sbjct: 33 ISTSIVGAGIMAIPAAFKVLGVI--PSLSIIVIIAWLSNVSAG----FLMKSS---LAGE 83
Query: 391 RNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLM 504
YA + ++ GK+ +V V++ +V FG+ +++ ++
Sbjct: 84 STTYAGVMKESFGKSGAVAVTVVTMVVTFGSMIIFSII 121
>At1g67640.1 68414.m07716 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GB:AAC49885 GI:2576361 (Arabidopsis
thaliana); contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 441
Score = 31.9 bits (69), Expect = 0.38
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNP 399
M G+GVL+LP A+ GW GV I+I+ L+ ++ W ++ + + + +
Sbjct: 44 MVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYT------LWQMV-QMHEMVPGKRFDR 96
Query: 400 YAIIADQTLGKTXS--VVVSMAIIVTLFGASVVYLL 501
Y + G+ +VV +IV + G +VY++
Sbjct: 97 YHELGQHAFGEKLGLWIVVPQQLIVEV-GVDIVYMV 131
>At5g19500.1 68418.m02323 tryptophan/tyrosine permease family
protein contains Pfam profile PF03222:
Tryptophan/tyrosine permease family
Length = 505
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 187 SVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMC 306
S+ L+AG G+G+LA+P +G++ + ++C
Sbjct: 109 SLSSAIFLVAGTTVGAGILAIPAVTQESGFLASAVACILC 148
>At1g24400.1 68414.m03076 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 441
Score = 31.5 bits (68), Expect = 0.51
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNP 399
M G+GVL+LP A+ GW GV I+++ ++ ++ W ++ E + + +
Sbjct: 44 MVGAGVLSLPYAMSNLGWGPGVTIMVMSWIITLYT------LWQMV-EMHEIVPGKRLDR 96
Query: 400 YAIIADQTLGKTXS--VVVSMAIIVTLFGASVVYLL 501
Y + G+ +VV +IV + G +VY++
Sbjct: 97 YHELGQHAFGEKLGLWIVVPQQLIVEV-GVDIVYMV 131
>At5g65990.1 68418.m08308 amino acid transporter family protein
similar to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 427
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXR--- 393
+ G+GVL LP +TGW +L L F C +L +L S
Sbjct: 51 IVGAGVLGLPYTFKKTGW------LLGLLTLLFVSSLTFFCMMLLVHTRRKLESLSGFNS 104
Query: 394 -NPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLLMAA 510
+ + + G +VV + ++++ G V YL+ A
Sbjct: 105 ITSFGDLGESVCGPAGRLVVDVMLVLSQSGFCVSYLIFVA 144
>At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (DPB)
similar to Swiss-Prot:Q14186 transcription factor DP-1
[Homo sapiens]; contains Pfam profile PF02319:
Transcription factor E2F/dimerisation partner (TDP)
Length = 385
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 324 TEGRHQAHQNDNGNTNPSSPDKGSRESQDSAACHLS-GDQHTRLPNAESAVLTTTVAIFA 148
+ H H+++N N NPS+ G+ S S + S G +R + V +T+ F
Sbjct: 6 SNSNHNHHESNNNNNNPSTRSWGTAVSGQSVSTSGSMGSPSSRSEQTITVVTSTSDTTFQ 65
Query: 147 TLCN 136
L N
Sbjct: 66 RLNN 69
>At4g35080.2 68417.m04981 high-affinity nickel-transport family
protein contains Pfam domain, PF03824: High-affinity
nickel-transport protein
Length = 336
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/90 (20%), Positives = 34/90 (37%)
Frame = +1
Query: 10 SCNSDLVSTASSTRQHNYLNMSKNGLXEPSGSQPTPKETTPLITXXXXXXXXXXXXXXLS 189
SCNS + + + N N S NG + S+P P T + T +
Sbjct: 52 SCNSSQIPSLYTPIGSNTTNNSFNGSPKSDESKPNPGFLTRIATSASEQRKTLSTGTVIL 111
Query: 190 VGQTSMLIAGEMAGSGVLALPRALVRTGWI 279
+ ++L+ + A + ++GW+
Sbjct: 112 ISAVAVLLLNPLLAPPAFASFQTAAKSGWL 141
>At4g35080.1 68417.m04980 high-affinity nickel-transport family
protein contains Pfam domain, PF03824: High-affinity
nickel-transport protein
Length = 365
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/90 (20%), Positives = 34/90 (37%)
Frame = +1
Query: 10 SCNSDLVSTASSTRQHNYLNMSKNGLXEPSGSQPTPKETTPLITXXXXXXXXXXXXXXLS 189
SCNS + + + N N S NG + S+P P T + T +
Sbjct: 52 SCNSSQIPSLYTPIGSNTTNNSFNGSPKSDESKPNPGFLTRIATSASEQRKTLSTGTVIL 111
Query: 190 VGQTSMLIAGEMAGSGVLALPRALVRTGWI 279
+ ++L+ + A + ++GW+
Sbjct: 112 ISAVAVLLLNPLLAPPAFASFQTAAKSGWL 141
>At3g11900.1 68416.m01459 amino acid transporter family protein low
similarity to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 432
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Frame = +1
Query: 196 QTSMLIAGEMAGSGVLALPRALVRTGWIGVPI-IILMCLVAAFSGKRLGDCWTILEERNP 372
QT I + G+GVL LP A GW+ + +I++ + L C LE
Sbjct: 35 QTLGNIIVSIVGTGVLGLPYAFRIAGWLAGSLGVIIVGFATYYCMLLLIQCRDKLESEEG 94
Query: 373 QLXSXXRNPYAIIADQTLGKTXSVVVSMAIIVTLFGASVVYLL 501
+ S Y + + +G + I G SV YL+
Sbjct: 95 EEES---KTYGDLGFKCMGTKGRYLTEFLIFTAQCGGSVAYLV 134
>At1g48640.1 68414.m05444 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 453
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNP 399
M G+GVL LP + + GW G+ ++IL ++ ++ W ++ E + + +
Sbjct: 56 MVGAGVLGLPFFMAQLGWGPGIAVLILSWIITLYT------LWQMV-EMHEMVPGKRFDR 108
Query: 400 YAIIADQTLGKTXS--VVVSMAIIVTLFGASVVYLL 501
Y + G+ ++V IIV + G +VY++
Sbjct: 109 YHELGQFAFGERLGLYIIVPQQIIVEV-GVCIVYMV 143
>At1g61270.1 68414.m06905 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 451
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLXSXXRNP 399
+ G+GVL LP A+ GW GV ++IL ++ ++ W ++ E + +
Sbjct: 49 IVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYT------FWQMI-EMHEMFEGKRFDR 101
Query: 400 YAIIADQTLGKTXS--VVVSMAIIVTLFGASVVYLL 501
Y + GK +VV + ++V A +VY++
Sbjct: 102 YHELGQAAFGKKLGLYIVVPLQLLVET-SACIVYMV 136
>At3g01760.1 68416.m00114 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter [Arabidopsis thaliana] GI:2576361; contains
Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 479
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFS 324
+ G+GVL LP A+ GW GV ++IL ++ ++
Sbjct: 71 IVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYT 105
>At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:7381227;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 468
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 333 SLATEGR--HQAHQNDNGNTNPSSPDKGSRESQD 238
S TE R HQA Q + + NP+ P K SQD
Sbjct: 25 SYGTEARLHHQASQPPSPSPNPNDPSKSPSRSQD 58
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -3
Query: 588 GSDHDQVPSANGQCWDQSE*ELFDDXSCHQQVHDRSSKEGYNDR---HGHDHAXGLAESL 418
G D + + + CWD E L + +Q ++GY + HG D LA+ L
Sbjct: 921 GKDSLMMATGSVSCWDNEEWTLDSNERLQEQEEYDEDEDGYQEEDKIHGVDENIDLAQEL 980
>At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 497
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 324 TEGRHQAHQNDNGNTNPSSPDKGSRESQDSAACHLSGDQHTRLPNAESAVLTTTVAIFAT 145
++ HQ + N+N NT+ ++ +GSR + + + +G+ T A+S T +F T
Sbjct: 16 SDQHHQDNNNNNNNTSTNTVVRGSRTTTPAPSSVSNGESQT---TAQSPSQTPNHPMFTT 72
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = -3
Query: 501 QQVHDRSSKEGYNDRHGHDHAXGLAESLISNNSVWVPXXAXQLRIAFL---QNGPAVTES 331
Q+ +D +S ++ H HA L + + + +VP + +FL + AV
Sbjct: 51 QEPYDNNSMFYGPPQYHHQHASNLGSGMSTAPNFYVPYVNYEAPPSFLLSHGSNDAVVGV 110
Query: 330 LATEGRHQAHQNDNGNTNPSS 268
+TE AH D+G SS
Sbjct: 111 TSTEHERNAHFMDHGFKRKSS 131
>At2g45620.1 68415.m05672 nucleotidyltransferase family protein low
similarity to SP|O13833| Caffeine-induced death protein
1 {Schizosaccharomyces pombe}; contains Pfam profiles
PF03828: PAP/25A associated domain, PF01909:
Nucleotidyltransferase domain
Length = 764
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 609 KEDKRSHGSDHDQVPSANGQCWDQS 535
K+D R G +HDQ + + W+QS
Sbjct: 259 KDDDRGMGRNHDQAMGEHSKVWNQS 283
>At1g71680.1 68414.m08271 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GB: AAC49885 GI:2576361 from (Arabidopsis
thaliana); contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 434
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 223 MAGSGVLALPRALVRTGW-IGVPIIILMCLVAAFS 324
M G+GVL LP A+ + GW G+ II+ + +S
Sbjct: 52 MVGAGVLGLPFAMSQLGWGPGLVAIIMSWAITFYS 86
>At1g26210.1 68414.m03198 expressed protein similar to hypothetical
protein GI:6524175 from [Arabidopsis thaliana]
Length = 148
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 303 HQNDNGNTNPSSPDKGSRESQDSAACHLSGDQHTRLP 193
++ND+G+T S D G ES DS A S +LP
Sbjct: 56 YENDDGDT---SDDGGDEESDDSMASDASSGPSNQLP 89
>At2g32740.1 68415.m04006 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 468
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 351 GPAVTESLATEGRHQAHQNDNGNTNPSSPDKGSRESQDSAAC-HLSGDQHTRLPNAESAV 175
G + + LA++GR + D + + S P K QDS C GD TR +S +
Sbjct: 303 GEIIRQCLASQGRCKFLDCDTSSKDCSDPVKVVEVFQDSVFCLQPPGDTPTRRSTFDS-I 361
Query: 174 LTTTVAIF 151
L + +F
Sbjct: 362 LAGCIPVF 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,684,911
Number of Sequences: 28952
Number of extensions: 248055
Number of successful extensions: 820
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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