Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_F18
(939 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 1e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.033
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.077
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.31
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 5.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 8.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect(2) = 1e-05
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 501 PPPPGGGPXXXXXXPPPPPPPXXGKXXGGPR 409
PPPP P PPPPPPP GG R
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 32.7 bits (71), Expect = 0.077
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 520 GGPXPXPPXPGGXAXXXXXRXPPPPPP 440
GGP P PP PG PPPPPP
Sbjct: 759 GGPPPPPPPPG--VAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = -2
Query: 695 KPPXPXPLXXXXPXGAPXXRFFPGXPPXXGXXLLPP----XGGXXPPPPPP 555
K P P P P AP P P G PP G PPPPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 689 PXPXPLXXXXPXGAPXXRFFPGXPPXXGXXLLPPXGGXXPPPPPP 555
P P P P AP P PP G + G PPPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPG---VAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 481 PXPRGXGGXX*GPPPPPPXTXXXRXGG 561
P P G G GPPPPPP GG
Sbjct: 765 PPPPGVAGA--GPPPPPPPPPAVSAGG 789
Score = 27.5 bits (58), Expect(2) = 1e-05
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 693 TPXPXAPXXXXPXXGPXXPVFPRXXPXXGGXPXPP 589
+P P P P P P P GG P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 501 PPPPGGGPXXXXXXPPPPPPPXXGKXXGGP 412
P P P PPPPPP G GP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 939 PPPXXPPGGGXXXPPXXXPXXXAPXPXXXGGG 844
PPP PPG PP P P P GG
Sbjct: 762 PPPPPPPGVAGAGPPPPPP----PPPAVSAGG 789
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = -1
Query: 501 PPPPGGGPXXXXXXPPPPPP--PXXGKXXGGP 412
PPPP G PPPPPP G P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -3
Query: 514 PXPXP-PXPGGXAXXXXXRXPPPPPPXXGXXXXRPPXGXXXXAXX*GGPK 368
P P P P P PPPPPP PP A GG +
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 937 PPXGAPGGGXXXPPPXP 887
PP G G G PPP P
Sbjct: 766 PPPGVAGAGPPPPPPPP 782
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.033
Identities = 25/78 (32%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +1
Query: 556 GGGGGGXXPPXGGXRXXPXXGGXPGKNRXXGAPXGXXXXRGXGXGGXXXGXPPPGGXPXK 735
GGG GG P GG GG + G G G GG G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 736 XXGPPXXXGXG-AXXGGP 786
G P G G GGP
Sbjct: 254 FGGGPGGFGGGPGGHGGP 271
Score = 33.5 bits (73), Expect = 0.044
Identities = 28/85 (32%), Positives = 28/85 (32%)
Frame = +1
Query: 493 GXGGXX*GPPPPPPXTXXXRXGGGGGGXXPPXGGXRXXPXXGGXPGKNRXXGAPXGXXXX 672
G GG G PPP P G GG G G G G G P G
Sbjct: 192 GFGGGS-GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF--- 247
Query: 673 RGXGXGGXXXGXPPPGGXPXKXXGP 747
G G GG G GG P GP
Sbjct: 248 -GGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 29.5 bits (63), Expect = 0.72
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 443 GGGGGGSXXXXXGPPPGGGG 502
GGG GG GPPPG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGG 206
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.077
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -2
Query: 728 GXPPGGGXPXXKPPXPXPLXXXXPXGAPXXRFFPGXPPXXGXXLLPPXGGXXPPPPP 558
G PP PP P P P P P PP + P G P PPP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 704 PXXKPPXPXPLXXXXPXGAPXXRFFPGXPPXXGXXLLPPXGGXXPPPPP 558
P PP P P P AP P P G +PP P P P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -2
Query: 728 GXPPGGGXPXXKPPXPXPLXXXXPXGAPXXRFFPGXPPXXGXXLLPPXGGXXPPPPPP 555
G PP PP P P P P P P G +P PP PPP
Sbjct: 1138 GAPPVPKPSVAAPPVPAP-SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 29.1 bits (62), Expect = 0.95
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = -2
Query: 782 PPXXAPXPXXXGGPXFLXGXPPGGGXPXXKPPXPXPLXXXXPXGAPXXRFFPGXPPXXGX 603
PP P P G PP PP P P P P P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP-SEAPPVPKPSVGVPPVPPPSTAP 1217
Query: 602 XLLPPXGGXXPPPPPPXRXXXV 537
+ P G P P P + V
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPV 1239
Score = 27.9 bits (59), Expect = 2.2
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = -2
Query: 782 PPXXAPXPXXXGGPXFLXGXPPGGGXPXXKPPXPXPLXXXXPXGAPXXRFFPGXPPXXGX 603
PP AP P G PP P PP P P P P P P G
Sbjct: 1064 PPVPAPSSEIPSIPA-PSGAPPVPA-PSGIPPVPKPSVAAPPVPKPSVA-VPPVPAPSGA 1120
Query: 602 XLLPPXGGXXPPPPPP 555
+P PP P P
Sbjct: 1121 PPVPKPSVAAPPVPVP 1136
Score = 26.6 bits (56), Expect = 5.0
Identities = 21/83 (25%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = -3
Query: 649 PXPTGFSPXXP-PXGGXPXSXXXXXXXXXXXPXXGXXGFXGGAXGGPXPXPPXPGGXAXX 473
P P+ +P P P G P P G A G P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 472 XXXRXPPPPPPXXGXXXXRPPXG 404
PP PPP P G
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -2
Query: 710 GXPXXKPPXPXPLXXXXPXGAPXXRFFPGXPPXXGXXLLPPXGGXXPPPPPP 555
G P PP P P AP P P G +P PP P P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGA--PPVPAPSGIPPVPKPSVAAPPVPKP 1107
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -1
Query: 501 PPPPGGGPXXXXXXPPPPPPP 439
PPPPG P PPPPPPP
Sbjct: 13 PPPPGFEPPSQ---PPPPPPP 30
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 520 GGPXPXPPXPGGXAXXXXXRXPPPPPP 440
G P P PP PG + PPPPPP
Sbjct: 7 GNPPPPPPPPG---FEPPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.54
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 501 PPPPGGGPXXXXXXPPPPPPP 439
PPPP P PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.31
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -2
Query: 782 PPXXAPXPXXXGGPXFLXGXPPGGGXPXXKPPXPXPLXXXXPXGAPXXRFFPGXPPXXGX 603
PP P P L P P P P PL P P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPS-LPMGAPAAP-PLPPSAPIAPPLPAGMPAAPP---- 468
Query: 602 XLLPPXGGXXPPPPPP 555
LPP PP P P
Sbjct: 469 --LPPAAPAPPPAPAP 482
Score = 29.5 bits (63), Expect = 0.72
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = -2
Query: 629 PGXPPXX---GXXLLPPXGGXXPPPPPP 555
P PP G LPP G PPPPPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/76 (27%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = -3
Query: 514 PXPXPPXP-GGXAXXXXXRXPPPPPPXXGXXXXRPPXGXXXXAXX*GGPKXXXXPXFPPX 338
P P P A + PPPPPP +PP G + P P
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIG--NGSSNSSLPPPPPPPRSNAA 348
Query: 337 GXFS-XPRGXGGPPXP 293
G P+G PP P
Sbjct: 349 GSIPLPPQGRSAPPPP 364
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 498 PPPGGGPXXXXXXPPPPPP 442
PP G G PPPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Frame = -2
Query: 695 KPPXPXPLXXXXPXG--APXXRFFPGXPPXXGXXLLPPXGGXX-----PPPPPPXR 549
KPP P P A R P PP PP G PPPPPP R
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 495 PPGGGPXXXXXXPPPPPPP 439
PP G PPPPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +1
Query: 556 GGGGGGXXPPXGGXRXXPXXGGXPGKNRXXGAPXGXXXXRGXGXGGXXXGXPPPGGXPXK 735
GG GGG G GG + R G P G G G G P +
Sbjct: 137 GGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGGSR 196
Query: 736 XXGPP 750
PP
Sbjct: 197 PSQPP 201
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = -1
Query: 501 PPPPGGGPXXXXXXPPPPPPPXXGKXXGGPRXG 403
PPPP P PPPP P G
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 492 PGGGPXXXXXXPPPPPPP 439
P G PPPPPPP
Sbjct: 295 PSSGDSANGGLPPPPPPP 312
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 459 PPPPPPPXXGKXXGG 415
PPPPPPP GG
Sbjct: 946 PPPPPPPPLVSAAGG 960
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.160 0.564
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,460,608
Number of Sequences: 5004
Number of extensions: 44382
Number of successful extensions: 393
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 477327454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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