Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_P18
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 52 3e-06
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 52 3e-06
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 52 3e-06
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 52 3e-06
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 52 3e-06
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 52 3e-06
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 50 1e-05
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 48 5e-05
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 48 5e-05
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 48 5e-05
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 48 5e-05
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 43 0.001
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 38 0.038
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 38 0.038
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 33 1.9
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 33 1.9
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 33 1.9
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 33 1.9
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 33 1.9
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 33 1.9
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 33 1.9
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 33 1.9
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 33 1.9
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 33 1.9
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G H + +KIR S FRRP T PKY KS P+RN++D Y IIK
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK 78
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G H + +KIR S FRRP T PKY KS P+RN++D Y IIK
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK 78
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G H + +KIR S FRRP T PKY KS P+RN++D Y IIK
Sbjct: 22 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK 69
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G H + +KIR S FRRP T PKY KS P+RN++D Y IIK
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK 78
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G H + +KIR S FRRP T PKY KS P+RN++D Y IIK
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK 78
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G H + +KIR S FRRP T PKY KS P+RN++D Y IIK
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIK 78
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 50.0 bits (114), Expect = 1e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNII 888
G H + +KIR S FRRP T PKY KS P+RN++D Y II
Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAII 77
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G HG + +KIR S F+RP T P+Y K+ P+RN++D Y IIK
Sbjct: 31 GVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIK 78
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G HG + +KIR S F+RP T P+Y K+ P+RN++D Y IIK
Sbjct: 31 GVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIK 78
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G HG + +KIR S F+RP T P+Y K+ P+RN++D Y IIK
Sbjct: 31 GVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIK 78
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G HG + +KIR S F+RP T P+Y K+ P+RN++D Y IIK
Sbjct: 31 GVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIK 78
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 748 GEHGKRVRKIRNSVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
G H +K R S+ F+RP T P+Y KS P+RN++ Y +IK
Sbjct: 31 GVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIK 78
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 38.3 bits (85), Expect = 0.038
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 784 SVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
S+ FRRP T P+Y KS P+RN++ Y IIK
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIK 37
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 38.3 bits (85), Expect = 0.038
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 784 SVHFRRPXTFEPPXHPKYQXKSLPKRNRMDAYNIIK 891
S+ FRRP T P+Y KS P+RN++ Y IIK
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIK 37
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 35 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 92
Query: 710 NRFHYFF 690
RF + F
Sbjct: 93 LRFGFGF 99
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 354 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 411
Query: 710 NRFHYFF 690
RF + F
Sbjct: 412 LRFGFGF 418
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 372 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 429
Query: 710 NRFHYFF 690
RF + F
Sbjct: 430 LRFGFGF 436
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 35 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 92
Query: 710 NRFHYFF 690
RF + F
Sbjct: 93 LRFGFGF 99
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 354 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 411
Query: 710 NRFHYFF 690
RF + F
Sbjct: 412 LRFGFGF 418
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 35 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 92
Query: 710 NRFHYFF 690
RF + F
Sbjct: 93 LRFGFGF 99
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 354 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 411
Query: 710 NRFHYFF 690
RF + F
Sbjct: 412 LRFGFGF 418
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 35 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 92
Query: 710 NRFHYFF 690
RF + F
Sbjct: 93 LRFGFGF 99
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 354 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 411
Query: 710 NRFHYFF 690
RF + F
Sbjct: 412 LRFGFGF 418
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 32.7 bits (71), Expect = 1.9
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 890 LMML*ASMRFLLGRDXLWYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFPLSLKCFS 711
LM+ S FLLG YLGC +VLG RK ++ I L+ + F T L+L+ S
Sbjct: 354 LMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQ--S 411
Query: 710 NRFHYFF 690
RF + F
Sbjct: 412 LRFGFGF 418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,423,155
Number of Sequences: 237096
Number of extensions: 944195
Number of successful extensions: 2071
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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