Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P04
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.9  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   8.6  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   8.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   8.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   8.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   8.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 739 PGGKPASLTRAATAS 695
           PGG P S+ +AAT+S
Sbjct: 402 PGGVPTSVIQAATSS 416



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 302 PPXIPHGVPWTLLNAASYCLS 364
           PP  P GVP +++ AA+  +S
Sbjct: 398 PPRGPGGVPTSVIQAATSSVS 418


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 167 VDKXLSVLDGXXHHVDEXPFDPSA 96
           +DK    LDG   H D+ P  P +
Sbjct: 424 LDKCYFCLDGKLPHDDQPPLSPQS 447


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 210 INPQXETVITQVAEGXKADI 269
           + PQ ET++T V+    +D+
Sbjct: 116 VRPQNETILTTVSSEADSDV 135


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 210 INPQXETVITQVAEGXKADI 269
           + PQ ET++T V+    +D+
Sbjct: 164 VRPQNETILTTVSSEADSDV 183


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 210 INPQXETVITQVAEGXKADI 269
           + PQ ET++T V+    +D+
Sbjct: 164 VRPQNETILTTVSSEADSDV 183


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 210 INPQXETVITQVAEGXKADI 269
           + PQ ET++T V+    +D+
Sbjct: 164 VRPQNETILTTVSSEADSDV 183


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 626 FPRHHWYGVIPRYYLTAHSDR 564
           FPR H +  +PR  L+   DR
Sbjct: 68  FPRSHRFKSLPRCQLSNKRDR 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,342
Number of Sequences: 438
Number of extensions: 4386
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)