Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_N08
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 1.6
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 24 1.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 23 3.7
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 4.9
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 4.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 6.5
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 407 MIFYIFLRNKNMSYVDNLFV 466
M+ YIFL K++ NLFV
Sbjct: 72 MVVYIFLSTKSLRTPSNLFV 91
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 407 MIFYIFLRNKNMSYVDNLFV 466
M+ YIFL K++ NLFV
Sbjct: 38 MVVYIFLSTKSLRTPSNLFV 57
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 197 YFFNLIVPCVLISS 210
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 197 YFFNLIVPCVLISS 210
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 197 YFFNLIVPCVLISS 210
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 197 YFFNLIVPCVLISS 210
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 197 YFFNLIVPCVLISS 210
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 197 YFFNLIVPCVLISS 210
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 265 YFFNLIVPCVLISS 278
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 515 YFINLIIPAVLDSN 556
YF NLI+P VL S+
Sbjct: 265 YFFNLIVPCVLISS 278
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 532 NQIYKISILYQFIKNKKFVH-STNE 461
N K++ LY+F N+ VH STN+
Sbjct: 99 NDSLKVTRLYEFSDNELLVHISTNK 123
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.6 bits (46), Expect = 4.9
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 380 LKHDCIIIRMIFYIFL 427
+KHD + ++ FY+F+
Sbjct: 528 IKHDMVYLQKYFYLFM 543
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.6 bits (46), Expect = 4.9
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 380 LKHDCIIIRMIFYIFL 427
+KHD + ++ FY+F+
Sbjct: 528 IKHDMVYLQKYFYLFM 543
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 515 YFINLIIPAVL 547
YF NLI+P VL
Sbjct: 234 YFFNLIVPCVL 244
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,822
Number of Sequences: 438
Number of extensions: 3454
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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