Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_N03
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   124   1e-30
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    54   2e-09
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   8.6  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  124 bits (298), Expect = 1e-30
 Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
 Frame = +1

Query: 298 EKRGVPFKKPIIFLGNLGPRLKAAKSFHQYQLDIYQYFKGHPYGGTFDGRRPVLHILDPE 477
           + RGV   KP+ F G     +   KS   +  DIY+ +K  P  G +  R P L + DPE
Sbjct: 30  KSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDPE 89

Query: 478 LIKAIMIRDFDHFTDRNTLNSMEPRYLSRSLLNLKGLEWKGVRSTLTPAFSSSRLKNMIP 657
           LIK I+IRDF  F +R          LS  LLNL+   W+ +RS L+P F+S +LK M  
Sbjct: 90  LIKDILIRDFSKFANRGLGVFERTEPLSPHLLNLEVERWRPLRSRLSPIFTSGKLKEMFY 149

Query: 658 LIQQCSKQMVEFLRKFDGKE--IEMKQTMGHFTLEVIGACAFGIKCDALSNENHDLSK 825
           LI +CS  +  +L K   K   IE ++    FT +VIG+CAFGI   +++NEN +  +
Sbjct: 150 LIIECSLNLETYLDKLIEKNEPIECRELTARFTTDVIGSCAFGIDMSSMTNENSEFRR 207


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 53.6 bits (123), Expect = 2e-09
 Identities = 30/114 (26%), Positives = 58/114 (50%)
 Frame = +1

Query: 442 GRRPVLHILDPELIKAIMIRDFDHFTDRNTLNSMEPRYLSRSLLNLKGLEWKGVRSTLTP 621
           G + V+ ++DP  ++ I+  +   + D++T       +L   LL   G +W+  R  + P
Sbjct: 86  GPKLVICLIDPRDVEIILSSNV--YIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAP 143

Query: 622 AFSSSRLKNMIPLIQQCSKQMVEFLRKFDGKEIEMKQTMGHFTLEVIGACAFGI 783
            F  + LK+ I L    ++ +VE +RK +GKE +    M   T++++   A G+
Sbjct: 144 TFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELTVDILLETAMGV 197


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 540 TVQSVTVSKMIKIPDHY 490
           +++SVTV K+I   DH+
Sbjct: 449 SIESVTVDKLITYFDHF 465


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 540 TVQSVTVSKMIKIPDHY 490
           +++SVTV K+I   DH+
Sbjct: 449 SIESVTVDKLITYFDHF 465


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 540 TVQSVTVSKMIKIPDHY 490
           +++SVTV K+I   DH+
Sbjct: 75  SIESVTVDKLITYFDHF 91


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 407 YW*ISNWYW*NDFAAFKRGPRFPRKIIGF 321
           Y+ +S WYW +  +A+K   R  + +  F
Sbjct: 276 YYVMSLWYWIDRNSAYKIDQRIQKGLFLF 304


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,873
Number of Sequences: 438
Number of extensions: 3805
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)