Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M22
         (862 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   8.4  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   8.4  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   8.4  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   8.4  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   8.4  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   8.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.4  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 134 NKTMYLNNLYKY 99
           NKT++ NN YKY
Sbjct: 87  NKTIHNNNNYKY 98


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 134 NKTMYLNNLYKY 99
           NKT++ NN YKY
Sbjct: 87  NKTIHNNNNYKY 98


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 134 NKTMYLNNLYKY 99
           NKT++ NN YKY
Sbjct: 87  NKTIHNNNNYKY 98


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 134 NKTMYLNNLYKY 99
           NKT++ NN YKY
Sbjct: 87  NKTIHNNNNYKY 98


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 134 NKTMYLNNLYKY 99
           NKT++ NN YKY
Sbjct: 87  NKTIHNNNNYKY 98


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 134 NKTMYLNNLYKY 99
           NKT++ NN YKY
Sbjct: 320 NKTIHNNNNYKY 331


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = -2

Query: 474 VRVTRVCDGEC--AHSVVFSACCS*F 403
           V VT  C+     AH VV SAC S F
Sbjct: 36  VDVTLACNEASLKAHKVVLSACSSYF 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,049
Number of Sequences: 438
Number of extensions: 3153
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)