Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M19
         (954 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   1.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   1.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   1.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   4.1  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   7.1  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    22   9.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 311 VSGGSRHSRKQVDRSHSKPS 252
           VS  + H+ +   RSH+KPS
Sbjct: 254 VSSETNHNERSTPRSHAKPS 273


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 311 VSGGSRHSRKQVDRSHSKPS 252
           VS  + H+ +   RSH+KPS
Sbjct: 254 VSSETNHNERSTPRSHAKPS 273


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 311 VSGGSRHSRKQVDRSHSKPS 252
           VS  + H+ +   RSH+KPS
Sbjct: 254 VSSETNHNERSTPRSHAKPS 273


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 395 QSKFVGCRDSWSLCRSGSRKSSRAR 321
           Q++ +GC+D+ S C    RK   AR
Sbjct: 615 QNEPIGCKDASSYCGLRDRKYPDAR 639


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 432 PCYCKKCNKQFNR 470
           PC C  C K F+R
Sbjct: 42  PCKCHLCGKAFSR 54


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 263 CVICQLVFCCGDCRQRH 313
           CVIC+ V+C  +    H
Sbjct: 38  CVICERVYCSRNSLMTH 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,396
Number of Sequences: 438
Number of extensions: 3457
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31323201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)