Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M17
         (904 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358339-1|AAQ88705.1|  545|Homo sapiens PPFL826 protein.              31   7.6  
AY013707-1|AAG40096.2|  545|Homo sapiens LZP protein.                  31   7.6  
AK096435-1|BAC04788.1|  545|Homo sapiens protein ( Homo sapiens ...    31   7.6  

>AY358339-1|AAQ88705.1|  545|Homo sapiens PPFL826 protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +1

Query: 91  LLVIIGVAFVYSAPLTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGD----KPVSGALN 258
           LL+ +   F     ++ G +PN+  SPL ++ S+   I    L IF D    +P   AL 
Sbjct: 350 LLIPVTCEFPRLYTISEGYVPNLRNSPLEIM-SRNHGIFPFTLEIFKDNEFEEPYREALP 408

Query: 259 TLGLRPARSVDHVELVIH 312
           TL LR +     +E V+H
Sbjct: 409 TLKLRDSLYFG-IEPVVH 425


>AY013707-1|AAG40096.2|  545|Homo sapiens LZP protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +1

Query: 91  LLVIIGVAFVYSAPLTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGD----KPVSGALN 258
           LL+ +   F     ++ G +PN+  SPL ++ S+   I    L IF D    +P   AL 
Sbjct: 350 LLIPVTCEFPRLYTISEGYVPNLRNSPLEIM-SRNHGIFPFTLEIFKDNEFEEPYREALP 408

Query: 259 TLGLRPARSVDHVELVIH 312
           TL LR +     +E V+H
Sbjct: 409 TLKLRDSLYFG-IEPVVH 425


>AK096435-1|BAC04788.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39116 fis, clone NTONG2006301, highly similar to
           Mus musculus EF-9 mRNA. ).
          Length = 545

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +1

Query: 91  LLVIIGVAFVYSAPLTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGD----KPVSGALN 258
           LL+ +   F     ++ G +PN+  SPL ++ S+   I    L IF D    +P   AL 
Sbjct: 350 LLIPVTCEFPRLYTISEGYVPNLRNSPLEIM-SRNHGIFPFTLEIFKDNEFEEPYREALP 408

Query: 259 TLGLRPARSVDHVELVIH 312
           TL LR +     +E V+H
Sbjct: 409 TLKLRDSLYFG-IEPVVH 425


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,164,759
Number of Sequences: 237096
Number of extensions: 1034094
Number of successful extensions: 2278
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2221
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)