Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_M12
         (896 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000538-1|BAA91239.1|  474|Homo sapiens protein ( Homo sapiens ...    34   0.61 
AL672291-3|CAI18800.1|  474|Homo sapiens zinc finger protein 692...    31   4.3  

>AK000538-1|BAA91239.1|  474|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20531 fis, clone KAT10870. ).
          Length = 474

 Score = 34.3 bits (75), Expect = 0.61
 Identities = 23/78 (29%), Positives = 35/78 (44%)
 Frame = +2

Query: 521 KASKRPGTVKRPRCWRFSIGSAPLDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPV 700
           K +  P T +R  C   + G    D   ++   +Q  R P+      + P    L+RSPV
Sbjct: 135 KPASLPHTTRRSWCSEATSGQELADLESEHDERTQEARLPS------SEPDAPRLLRSPV 188

Query: 701 PTLPLTGYCPPSPSXLAS 754
              P  G  PP+P+ L+S
Sbjct: 189 TCTPKEGETPPAPAALSS 206


>AL672291-3|CAI18800.1|  474|Homo sapiens zinc finger protein 692
           protein.
          Length = 474

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +2

Query: 521 KASKRPGTVKRPRCWRFSIGSAPLDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPV 700
           K +  P T +R  C   + G    D   ++   +Q  R P+      + P    L+ SPV
Sbjct: 135 KPASLPHTTRRSWCSEATSGQELADLESEHDERTQEARLPS------SEPDAPRLLPSPV 188

Query: 701 PTLPLTGYCPPSPSXLAS 754
              P  G  PP+P+ L+S
Sbjct: 189 TCTPKEGETPPAPAALSS 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,385,306
Number of Sequences: 237096
Number of extensions: 2044087
Number of successful extensions: 5187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5176
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)