Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L22
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   254   6e-70
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   254   6e-70
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.6  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  254 bits (623), Expect = 6e-70
 Identities = 133/207 (64%), Positives = 148/207 (71%), Gaps = 5/207 (2%)
 Frame = +1

Query: 277 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 456
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 457 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 636
           VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF     
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120

Query: 637 XXXXXXXTSLCFVYPL-----TSHVPVLPPMSVREMASVNSPVSVTASARSSSPTV*SVC 801
                  TSLCFVYPL          V      RE   + + ++    A   +       
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLY---- 176

Query: 802 TEVSGVSVQGIIIYRASYFGFYDTARG 882
               GVSVQGIIIYRA+YFGFYDTARG
Sbjct: 177 -RGFGVSVQGIIIYRAAYFGFYDTARG 202



 Score = 82.6 bits (195), Expect = 4e-18
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = +3

Query: 678 PLDFARARLAADVGKGDGQREFSGLGXCISKIFKSDGLIGLYRGFG 815
           PLDFAR RLAADVGK  G+REF+GLG C++KIFK+DG+ GLYRGFG
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFG 180



 Score = 27.5 bits (58), Expect = 0.17
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +1

Query: 364 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 522
           P + V+  + +Q  S +  ++  YK  +  +  I K +G  +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/48 (20%), Positives = 22/48 (45%)
 Frame = +3

Query: 666 VLRVPLDFARARLAADVGKGDGQREFSGLGXCISKIFKSDGLIGLYRG 809
           ++  P D  R R+    G+   +  +     C + I+K++G    ++G
Sbjct: 228 IVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  254 bits (623), Expect = 6e-70
 Identities = 133/207 (64%), Positives = 148/207 (71%), Gaps = 5/207 (2%)
 Frame = +1

Query: 277 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 456
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 457 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 636
           VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF RYF     
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120

Query: 637 XXXXXXXTSLCFVYPL-----TSHVPVLPPMSVREMASVNSPVSVTASARSSSPTV*SVC 801
                  TSLCFVYPL          V      RE   + + ++    A   +       
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLY---- 176

Query: 802 TEVSGVSVQGIIIYRASYFGFYDTARG 882
               GVSVQGIIIYRA+YFGFYDTARG
Sbjct: 177 -RGFGVSVQGIIIYRAAYFGFYDTARG 202



 Score = 82.6 bits (195), Expect = 4e-18
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = +3

Query: 678 PLDFARARLAADVGKGDGQREFSGLGXCISKIFKSDGLIGLYRGFG 815
           PLDFAR RLAADVGK  G+REF+GLG C++KIFK+DG+ GLYRGFG
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFG 180



 Score = 27.5 bits (58), Expect = 0.17
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +1

Query: 364 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 522
           P + V+  + +Q  S +  ++  YK  +  +  I K +G  +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/48 (20%), Positives = 22/48 (45%)
 Frame = +3

Query: 666 VLRVPLDFARARLAADVGKGDGQREFSGLGXCISKIFKSDGLIGLYRG 809
           ++  P D  R R+    G+   +  +     C + I+K++G    ++G
Sbjct: 228 IVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 543 ERLGREVPDDVGEVTTPE 490
           ER  RE+PDD+ +   P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 543 ERLGREVPDDVGEVTTPE 490
           ER  RE+PDD+ +   P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 746 GEFTLAISLTDIGGKTGTCEVK 681
           G++ +  +    GGK G C +K
Sbjct: 603 GQYGIVFACDGWGGKAGPCAIK 624


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 746 GEFTLAISLTDIGGKTGTCEVK 681
           G++ +  +    GGK G C +K
Sbjct: 641 GQYGIVFACDGWGGKAGPCAIK 662


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,552
Number of Sequences: 438
Number of extensions: 5005
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)