Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L17
(883 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein. 32 3.2
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein. 32 3.2
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein. 32 3.2
AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20 pro... 32 3.2
L31584-1|AAA74230.1| 378|Homo sapiens G protein-coupled recepto... 30 9.7
L31581-1|AAA74231.1| 378|Homo sapiens G protein-coupled recepto... 30 9.7
L08176-1|AAA58615.1| 378|Homo sapiens EBV induced G-protein cou... 30 9.7
EF064758-1|ABK41941.1| 378|Homo sapiens chemokine (C-C motif) r... 30 9.7
BC035343-1|AAH35343.1| 378|Homo sapiens chemokine (C-C motif) r... 30 9.7
AY587876-1|AAT52232.1| 378|Homo sapiens CC chemokine receptor 7... 30 9.7
AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein. 30 9.7
>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 588 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI-AHAVCISVRCRSFAP 764
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 269
Query: 765 SWAVCTN-PPFSPTAAP 812
SW + T PP S T P
Sbjct: 270 SWKLGTTVPPISFTPGP 286
>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 588 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI-AHAVCISVRCRSFAP 764
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 269
Query: 765 SWAVCTN-PPFSPTAAP 812
SW + T PP S T P
Sbjct: 270 SWKLGTTVPPISFTPGP 286
>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 588 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI-AHAVCISVRCRSFAP 764
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 269
Query: 765 SWAVCTN-PPFSPTAAP 812
SW + T PP S T P
Sbjct: 270 SWKLGTTVPPISFTPGP 286
>AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20
protein.
Length = 255
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 588 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI-AHAVCISVRCRSFAP 764
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 84 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 143
Query: 765 SWAVCTN-PPFSPTAAP 812
SW + T PP S T P
Sbjct: 144 SWKLGTTVPPISFTPGP 160
>L31584-1|AAA74230.1| 378|Homo sapiens G protein-coupled receptor
protein.
Length = 378
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1
Query: 235 IVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVAYHVWIQL 83
+VV +F YNG + ++ NF + S+C LSK +N+AY V L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314
>L31581-1|AAA74231.1| 378|Homo sapiens G protein-coupled receptor
protein.
Length = 378
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1
Query: 235 IVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVAYHVWIQL 83
+VV +F YNG + ++ NF + S+C LSK +N+AY V L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314
>L08176-1|AAA58615.1| 378|Homo sapiens EBV induced G-protein
coupled receptor protein.
Length = 378
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1
Query: 235 IVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVAYHVWIQL 83
+VV +F YNG + ++ NF + S+C LSK +N+AY V L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314
>EF064758-1|ABK41941.1| 378|Homo sapiens chemokine (C-C motif)
receptor 7 protein.
Length = 378
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1
Query: 235 IVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVAYHVWIQL 83
+VV +F YNG + ++ NF + S+C LSK +N+AY V L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314
>BC035343-1|AAH35343.1| 378|Homo sapiens chemokine (C-C motif)
receptor 7 protein.
Length = 378
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1
Query: 235 IVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVAYHVWIQL 83
+VV +F YNG + ++ NF + S+C LSK +N+AY V L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314
>AY587876-1|AAT52232.1| 378|Homo sapiens CC chemokine receptor 7
protein.
Length = 378
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1
Query: 235 IVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVAYHVWIQL 83
+VV +F YNG + ++ NF + S+C LSK +N+AY V L
Sbjct: 269 VVVFIVFQLPYNGVVLAQTVANFNITS-----STCELSKQLNIAYDVTYSL 314
>AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein.
Length = 1557
Score = 30.3 bits (65), Expect = 9.7
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Frame = +3
Query: 588 PDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLI-AHAVCISVRCRSFAP 764
PDR +P PW LP + C TCP + R L+ ++
Sbjct: 474 PDRYHPVPFPEPWTLPPEIQAKFLCVFERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 533
Query: 765 SWAVCTN-PPFSPTAAP 812
SW + T PP S T P
Sbjct: 534 SWKLGTTVPPISFTPGP 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,570,072
Number of Sequences: 237096
Number of extensions: 2826849
Number of successful extensions: 13046
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13042
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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