Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L13
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U84408-1|AAC50954.1|  296|Homo sapiens MyD88 protein.                  36   0.26 
U70451-1|AAB49967.1|  296|Homo sapiens MyD88 protein.                  36   0.26 
BT007376-1|AAP36040.1|  296|Homo sapiens myeloid differentiation...    36   0.26 
BC013589-1|AAH13589.1|  296|Homo sapiens myeloid differentiation...    36   0.26 
CR457095-1|CAG33376.1|  460|Homo sapiens NAP1L2 protein.               33   1.4  
BC026325-1|AAH26325.1|  460|Homo sapiens nucleosome assembly pro...    33   1.4  
AF136178-1|AAP97268.1|  460|Homo sapiens nucleosome assembly pro...    33   1.4  
AB027013-1|BAA84706.1|  460|Homo sapiens Nucleosome Assembly Pro...    33   1.4  
AK127085-1|BAC86820.1|  193|Homo sapiens protein ( Homo sapiens ...    31   7.5  

>U84408-1|AAC50954.1|  296|Homo sapiens MyD88 protein.
          Length = 296

 Score = 35.5 bits (78), Expect = 0.26
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 589 QVAIKHNDIISNEDVYVPITIDDDEGY-EQHYDAFVLYADEDREFVEEMINRL 744
           QVA   + +    ++    T+DD  G+  + +DAF+ Y   D +FV+EMI +L
Sbjct: 130 QVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICYCPSDIQFVQEMIRQL 182


>U70451-1|AAB49967.1|  296|Homo sapiens MyD88 protein.
          Length = 296

 Score = 35.5 bits (78), Expect = 0.26
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 589 QVAIKHNDIISNEDVYVPITIDDDEGY-EQHYDAFVLYADEDREFVEEMINRL 744
           QVA   + +    ++    T+DD  G+  + +DAF+ Y   D +FV+EMI +L
Sbjct: 130 QVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICYCPSDIQFVQEMIRQL 182


>BT007376-1|AAP36040.1|  296|Homo sapiens myeloid differentiation
           primary response gene (88) protein.
          Length = 296

 Score = 35.5 bits (78), Expect = 0.26
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 589 QVAIKHNDIISNEDVYVPITIDDDEGY-EQHYDAFVLYADEDREFVEEMINRL 744
           QVA   + +    ++    T+DD  G+  + +DAF+ Y   D +FV+EMI +L
Sbjct: 130 QVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICYCPSDIQFVQEMIRQL 182


>BC013589-1|AAH13589.1|  296|Homo sapiens myeloid differentiation
           primary response gene (88) protein.
          Length = 296

 Score = 35.5 bits (78), Expect = 0.26
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 589 QVAIKHNDIISNEDVYVPITIDDDEGY-EQHYDAFVLYADEDREFVEEMINRL 744
           QVA   + +    ++    T+DD  G+  + +DAF+ Y   D +FV+EMI +L
Sbjct: 130 QVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICYCPSDIQFVQEMIRQL 182


>CR457095-1|CAG33376.1|  460|Homo sapiens NAP1L2 protein.
          Length = 460

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 604 HNDIISNEDVYVPITIDDDEGYEQHYDAFVLYADEDRE 717
           H ++  NE+  V   +D+D+GYE +Y  + +  +E+ E
Sbjct: 182 HEEMYGNEEGMVHEYVDEDDGYEDYYYDYAVEEEEEEE 219


>BC026325-1|AAH26325.1|  460|Homo sapiens nucleosome assembly
           protein 1-like 2 protein.
          Length = 460

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 604 HNDIISNEDVYVPITIDDDEGYEQHYDAFVLYADEDRE 717
           H ++  NE+  V   +D+D+GYE +Y  + +  +E+ E
Sbjct: 182 HEEMYGNEEGMVHEYVDEDDGYEDYYYDYAVEEEEEEE 219


>AF136178-1|AAP97268.1|  460|Homo sapiens nucleosome assembly
           protein Bpx protein.
          Length = 460

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 604 HNDIISNEDVYVPITIDDDEGYEQHYDAFVLYADEDRE 717
           H ++  NE+  V   +D+D+GYE +Y  + +  +E+ E
Sbjct: 182 HEEMYGNEEGMVHEYVDEDDGYEDYYYDYAVEEEEEEE 219


>AB027013-1|BAA84706.1|  460|Homo sapiens Nucleosome Assembly
           Protein 1-like 2 protein.
          Length = 460

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 604 HNDIISNEDVYVPITIDDDEGYEQHYDAFVLYADEDRE 717
           H ++  NE+  V   +D+D+GYE +Y  + +  +E+ E
Sbjct: 182 HEEMYGNEEGMVHEYVDEDDGYEDYYYDYAVEEEEEEE 219


>AK127085-1|BAC86820.1|  193|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45142 fis, clone BRAWH3040711. ).
          Length = 193

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -1

Query: 840 WHLCEIS*ATRSIFCRVARQ*LLFSAYLKHSSKSINHFLDKFPVLI 703
           W LC  S    S+ C VA       + + HS  S+ H   K P+L+
Sbjct: 6   WFLCRPSSLFDSLSCSVAEMLTQHLSCVCHSPASVPHLYSKIPILV 51


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,259,709
Number of Sequences: 237096
Number of extensions: 1692226
Number of successful extensions: 3180
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3178
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)