Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_J12
(955 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 1.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 5.4
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 9.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 9.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 9.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 9.4
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 197 RNDRRAYEFQQRQALRDDWNQV 262
RN++R E +R+ + DW QV
Sbjct: 403 RNEKRLAEQDRRERMEFDWKQV 424
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 3.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 309 LWVGPRGFCSLCSKSRTWFQSSRRACL 229
LWV P + S C+ T+F ++ C+
Sbjct: 140 LWVPPAIYQSSCTIDVTYFPFDQQTCI 166
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 158 VVVDLFQSLGPGYYYLPSWLQL 93
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 158 VVVDLFQSLGPGYYYLPSWLQL 93
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 158 VVVDLFQSLGPGYYYLPSWLQL 93
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 158 VVVDLFQSLGPGYYYLPSWLQL 93
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 158 VVVDLFQSLGPGYYYLPSWLQL 93
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 158 VVVDLFQSLGPGYYYLPSWLQL 93
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 119 YYLPSWLQLQLVCLY 75
YYLP+W L L L+
Sbjct: 30 YYLPNWTDLVLAGLF 44
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 383 YDFRAKEETAPIDEPLYD 436
Y F + P+D+PLYD
Sbjct: 640 YKFDKRSFGFPLDKPLYD 657
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 9.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 383 YDFRAKEETAPIDEPLYD 436
Y F + P+D+PLYD
Sbjct: 640 YKFDKRSFGFPLDKPLYD 657
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 9.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 186 RKAAGTIAVPTSSSRDKLSVTTGTKFVT 269
RK I S + + VTTGTK V+
Sbjct: 276 RKVLAGIVQTKGSDAELICVTTGTKCVS 303
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 9.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 309 LWVGPRGFCSLCSKSRTWFQSSRRAC 232
L+V P F S C TWF + C
Sbjct: 137 LYVPPGIFKSTCKIDITWFPFDDQRC 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,368
Number of Sequences: 438
Number of extensions: 3677
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31323201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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