Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_J11
(875 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.52
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 25 0.69
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 25 0.69
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 24 2.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.8
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 2.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 4.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 4.9
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 4.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 4.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 8.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 8.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.52
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 475 SHVLSCVIPLILWITVLPPLSELIPLAA 392
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 25.4 bits (53), Expect = 0.69
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 611 RYQAFPPGSSLVALSCSDPAAYRIPVRL 694
+YQ P + + S DPA YRI R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 25.4 bits (53), Expect = 0.69
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 611 RYQAFPPGSSLVALSCSDPAAYRIPVRL 694
+YQ P + + S DPA YRI R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 775 WAVCTNPPFSPTAAP 819
W V +PP+SP AP
Sbjct: 264 WDVLPHPPYSPDLAP 278
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 496 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 398
G ++ CS +L S + +L ++PP S IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 292 EKTSHTSTLNLKHKMNAIVVV 230
E T TLNLKH A++V+
Sbjct: 56 EDAEDTQTLNLKHLRAAVLVL 76
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 636 APSLRSPVPTLPLTG 680
AP P+P+LPL G
Sbjct: 468 APCFEEPLPSLPLPG 482
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.6 bits (46), Expect = 4.9
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = +3
Query: 468 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 641
T +R V +PR WR +I S ++ G + +D+K TR
Sbjct: 382 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTE 441
Query: 642 SLRSPVPTLP 671
+LR V P
Sbjct: 442 ALRRFVEGYP 451
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.6 bits (46), Expect = 4.9
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = +3
Query: 468 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 641
T +R V +PR WR +I S ++ G + +D+K TR
Sbjct: 297 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTE 356
Query: 642 SLRSPVPTLP 671
+LR V P
Sbjct: 357 ALRRFVEGYP 366
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 4.9
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = +3
Query: 468 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 641
T +R V +PR WR +I S ++ G + +D+K TR
Sbjct: 616 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTE 675
Query: 642 SLRSPVPTLP 671
+LR V P
Sbjct: 676 ALRRFVEGYP 685
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 8.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 475 SHVLSCVIPLILWITVLPPLSELIPL 398
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 8.5
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 292 EKTSHTSTLNLKHKM 248
++ H+STL++ HKM
Sbjct: 238 DENRHSSTLDIDHKM 252
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,336
Number of Sequences: 438
Number of extensions: 5790
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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