Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_J01
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              28   0.10 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -1

Query: 578 CATTSEPMPG--FLKNIHALHHSRLDKAKLLCKCSSRVSLYV*HLKIGCRRCSA 423
           C    EP+P   +LKN  AL+H + DK  L+   +  +   V +   G   C A
Sbjct: 423 CHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYMCQA 476


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 370 PMEILQSKPELSLNKVGHALHLLHPIFRCYTYSETREEHLQ 492
           P+    +KPE +L  +     L+ P F  Y Y+  +E+H++
Sbjct: 346 PVAEFIAKPE-ALKLLDENWDLIAPYFLDYNYTIPKEKHVE 385


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 370 PMEILQSKPELSLNKVGHALHLLHPIFRCYTYSETREEHLQ 492
           P+    +KPE +L  +     L+ P F  Y Y+  +E+H++
Sbjct: 346 PVAEFIAKPE-ALKLLDENWDLIAPYFLDYNYTIPKEKHVE 385


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 801 YRFRKERVYYYTGNVVHKSSHNKSD 875
           YR  K  + YY    +H+  +NK +
Sbjct: 419 YRIYKRIIDYYHSYKMHQKPYNKDE 443


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 801 YRFRKERVYYYTGNVVHKSSHNKSD 875
           YR  K  + YY    +H+  +NK +
Sbjct: 419 YRIYKRIIDYYHSYKMHQKPYNKDE 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,698
Number of Sequences: 438
Number of extensions: 3938
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)