BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_I22
(870 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 29 0.074
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 0.39
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 0.39
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 26 0.39
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 26 0.39
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 26 0.52
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 26 0.52
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 26 0.52
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 26 0.52
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 26 0.52
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 26 0.52
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.69
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.69
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 1.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 1.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 1.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 1.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 1.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 6.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 6.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 6.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 6.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.5
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 28.7 bits (61), Expect = 0.074
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 79 TPSFRKSKILDIFLIFVLE--IFSKIKQNEDNLVHIVLL 189
T S KSKI +FLI +L+ + ++I+ NED+ +V L
Sbjct: 345 TESVLKSKIGQVFLITILDSKVSARIEMNEDDNTSLVSL 383
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNN 96
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNN 96
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRTERERSREPKIISSLSNNYNYSNYNN 96
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIVSSLSNNYNYSNYNN 96
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 25.4 bits (53), Expect = 0.69
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNN 96
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.4 bits (53), Expect = 0.69
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 289 YRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNN 329
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNN 96
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNN 96
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNN 96
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR Y + S RS D + E + L+ + SN+N+
Sbjct: 56 YREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNN 96
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS D + E + L+ + SN+N+
Sbjct: 289 YRKYGETSKERSRDRTERERSKEPKIISSLSNNYKYSNYNN 329
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 721 YRRYHQ*SNTRSSDYMDAWFGMEDLVXKGLAKSIGVSNFNS 843
YR+Y + S RS + + E + L+ + +N+N+
Sbjct: 278 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNN 318
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 411 VPKAMTGMNVPSR 373
VPK++ G+NV SR
Sbjct: 239 VPKSVAGLNVSSR 251
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,464
Number of Sequences: 438
Number of extensions: 4885
Number of successful extensions: 43
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -