Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_I13
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    25   1.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   5.0  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 713 IVSSAAPATAVNLMEINANHYNAYNLYSXFSY*XLNFRSTKPNKKYYHSI 862
           I+SS +  T  N    N N+YN YN Y+  +Y   N++    N  Y   I
Sbjct: 81  IISSLSNKTIHNNNNYNNNNYNNYN-YNNNNY--NNYKKLYYNINYIEQI 127


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 580 QTTPSECSGRSAFYQFFESRSILRAQICSFHVH*TKISRAES 455
           + TPS+CS  S  Y   ++ S L     S H+  + I+R  S
Sbjct: 359 ERTPSKCSQTSVHYSNGQTHSQLCPTPRSTHLKVSGINRVGS 400


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,874
Number of Sequences: 438
Number of extensions: 4967
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)