Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_H03
(1028 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 0.055
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 0.47
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.1
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 5.9
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect(2) = 0.055
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 603 PPPPPPP 623
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 657 PPPPPPP 677
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 658 PPPPPPP 678
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 913 PPPPPPP 933
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 603 PPPPPPP 623
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.8 bits (49), Expect(2) = 0.055
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 657 PPPPPPP 677
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.8 bits (49), Expect = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 658 PPPPPPP 678
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.8 bits (49), Expect = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 913 PPPPPPP 933
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 594 PXXPPPPPPPXXXPG 638
P P PPPPP G
Sbjct: 338 PPKPAPPPPPPSSSG 352
Score = 23.0 bits (47), Expect(2) = 0.47
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 766 GXGPXPPXXXGPPPPP 813
G PP PPPPP
Sbjct: 333 GDSDTPPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 7.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 949 PPPPXXXGGPPPPPP 993
PP P PPPPPP
Sbjct: 338 PPKP----APPPPPP 348
Score = 22.2 bits (45), Expect = 7.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 603 PPPPPPPXXXP 635
PPPPPP P
Sbjct: 343 PPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 7.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 914 PPPPPPXXXXP 946
PPPPPP P
Sbjct: 343 PPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 7.8
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 587 PPPPPPXXXPXGGKXXK 537
PPPPP P K K
Sbjct: 344 PPPPPSSSGPDSAKLDK 360
Score = 21.4 bits (43), Expect(2) = 0.47
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1
Query: 913 PPPPPPPXXXXXP 951
P PPPPP P
Sbjct: 341 PAPPPPPPSSSGP 353
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.0 bits (52), Expect = 1.1
Identities = 13/42 (30%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Frame = +1
Query: 754 PXXGGXGPXPPXXXGPPPPPXPXXXXXXXXPPP--PXXPPPA 873
P G GP P P P PPP P PP+
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPS 57
Score = 24.2 bits (50), Expect = 1.9
Identities = 11/34 (32%), Positives = 11/34 (32%)
Frame = +1
Query: 913 PPPPPPPXXXXXPPPPXXXGGPPPPPPXXXXXXP 1014
P PP PPP G PP P P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISP 67
Score = 24.2 bits (50), Expect = 1.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 772 GPXPPXXXGPPPPPXPXXXXXXXXPPPPXXP 864
G PP G P PP P PP P P
Sbjct: 407 GQLPPSA-GAPMPPIPNMSNMSGMPPLPNMP 436
Score = 23.0 bits (47), Expect = 4.5
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 913 PPPPPPPXXXXXPPPPXXXGGPPPPPP 993
P P P PP GPPP P
Sbjct: 25 PSPHQSPQAPQRGSPPNPSQGPPPGGP 51
Score = 23.0 bits (47), Expect = 4.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 344 GXPPPPXXXPXXWGXPPPPP 403
G PP P P G P PP
Sbjct: 37 GSPPNPSQGPPPGGPPGAPP 56
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related protein
STG-1 protein.
Length = 397
Score = 22.6 bits (46), Expect = 5.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -2
Query: 1000 GXXGXGGGAPPXXGGGXGXXXXXGGGGGG 914
G GG GG GGGGGG
Sbjct: 23 GSSSAGGVVTGASGGSIVVGANNGGGGGG 51
Score = 22.2 bits (45), Expect = 7.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 742 PPPPPXXGG 768
PPPPP GG
Sbjct: 376 PPPPPIRGG 384
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.162 0.625
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,931
Number of Sequences: 438
Number of extensions: 21605
Number of successful extensions: 105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 34346676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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