Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_H01
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006146-1|AAH06146.1| 358|Homo sapiens programmed cell death 2... 68 5e-11
S78085-1|AAB34865.1| 344|Homo sapiens PDCD2 protein. 33 1.0
BC067759-1|AAH67759.1| 99|Homo sapiens PDCD2 protein protein. 33 1.0
BC008378-1|AAH08378.1| 344|Homo sapiens programmed cell death 2... 33 1.0
AL031259-2|CAA20285.1| 344|Homo sapiens programmed cell death 2... 33 1.0
AY354497-1|AAR10443.1| 2916|Homo sapiens cadherin protein protein. 33 1.8
AK127704-1|BAC87093.1| 1366|Homo sapiens protein ( Homo sapiens ... 33 1.8
BC048200-1|AAH48200.1| 857|Homo sapiens MAP4 protein protein. 31 7.2
AK125245-1|BAC86099.1| 716|Homo sapiens protein ( Homo sapiens ... 31 7.2
AL031259-3|CAD92541.1| 177|Homo sapiens programmed cell death 2... 30 9.5
AB065479-1|BAC05733.1| 188|Homo sapiens seven transmembrane hel... 30 9.5
>BC006146-1|AAH06146.1| 358|Homo sapiens programmed cell death
2-like protein.
Length = 358
Score = 67.7 bits (158), Expect = 5e-11
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 286 CPLCGLHRLLVIQCYAPLENSVYHRTLYVFACINPNCWI-QSESWLCLRMQYEDKKTKEA 462
C CG LV+Q Y PLE S +HR L+VFAC P C + SW R Q +EA
Sbjct: 49 CQRCGQPLALVVQVYCPLEGSPFHRLLHVFACACPGCSTGGARSWKVFRSQCLQVPEREA 108
Query: 463 SAIVAIPNLETNLSWCSGADEWDENDNDDSANGNLMSVDNDPS 591
N WC GAD+W + + + + ND S
Sbjct: 109 QDAQKQGNSLAAEDWCEGADDWGSDTEEGPSPQFTLDFGNDAS 151
>S78085-1|AAB34865.1| 344|Homo sapiens PDCD2 protein.
Length = 344
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 286 CPLCGLHRLLVIQCYAPLEN--SVYHRTLYVFACINPNC 396
C LCG ++Q YAPL +HR +++F C C
Sbjct: 51 CELCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPC 89
>BC067759-1|AAH67759.1| 99|Homo sapiens PDCD2 protein protein.
Length = 99
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 286 CPLCGLHRLLVIQCYAPLEN--SVYHRTLYVFACINPNC 396
C LCG ++Q YAPL +HR +++F C C
Sbjct: 51 CELCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPC 89
>BC008378-1|AAH08378.1| 344|Homo sapiens programmed cell death 2
protein.
Length = 344
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 286 CPLCGLHRLLVIQCYAPLEN--SVYHRTLYVFACINPNC 396
C LCG ++Q YAPL +HR +++F C C
Sbjct: 51 CELCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPC 89
>AL031259-2|CAA20285.1| 344|Homo sapiens programmed cell death 2
protein.
Length = 344
Score = 33.5 bits (73), Expect = 1.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 286 CPLCGLHRLLVIQCYAPLEN--SVYHRTLYVFACINPNC 396
C LCG ++Q YAPL +HR +++F C C
Sbjct: 51 CELCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPC 89
>AY354497-1|AAR10443.1| 2916|Homo sapiens cadherin protein protein.
Length = 2916
Score = 32.7 bits (71), Expect = 1.8
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +1
Query: 415 WLCLRMQ--YEDKKTKEASAIVAIPN--LETNLSWCSGADEWDENDNDDSANGNL--MSV 576
W+ LR Q YE +T IP N+S WDENDN + ++ + V
Sbjct: 642 WIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKV 701
Query: 577 DNDPSPNNVVQRISDEDEES 636
+ P P V+ +I+ D +S
Sbjct: 702 EESPVPQGVIGKITAIDMDS 721
>AK127704-1|BAC87093.1| 1366|Homo sapiens protein ( Homo sapiens cDNA
FLJ45804 fis, clone NT2RI3005923, weakly similar to
Cadherin-related tumor suppressor precursor. ).
Length = 1366
Score = 32.7 bits (71), Expect = 1.8
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +1
Query: 415 WLCLRMQ--YEDKKTKEASAIVAIPN--LETNLSWCSGADEWDENDNDDSANGNL--MSV 576
W+ LR Q YE +T IP N+S WDENDN + ++ + V
Sbjct: 1141 WIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKV 1200
Query: 577 DNDPSPNNVVQRISDEDEES 636
+ P P V+ +I+ D +S
Sbjct: 1201 EESPVPQGVIGKITAIDMDS 1220
>BC048200-1|AAH48200.1| 857|Homo sapiens MAP4 protein protein.
Length = 857
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 439 EDKKTKEASAIVAIPNL----ETNLSWCSGADEWDEND-NDDSANGNL-MSVDNDPSPNN 600
E+K+TKE S V IP+L LS+C + D N DS N + +++ + S N+
Sbjct: 186 EEKETKEGSVAVQIPDLLEDKAQKLSFCEDQNAQDRNSKGSDSLNKKVDLTLLSPKSEND 245
Query: 601 VVQRIS 618
++ IS
Sbjct: 246 KLKEIS 251
>AK125245-1|BAC86099.1| 716|Homo sapiens protein ( Homo sapiens
cDNA FLJ43255 fis, clone HEART2010495, moderately
similar to MICROTUBULE-ASSOCIATED PROTEIN 4. ).
Length = 716
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 439 EDKKTKEASAIVAIPNL----ETNLSWCSGADEWDEND-NDDSANGNL-MSVDNDPSPNN 600
E+K+TKE S V IP+L LS+C + D N DS N + +++ + S N+
Sbjct: 216 EEKETKEGSVAVQIPDLLEDKAQKLSFCEDQNAQDRNSKGSDSLNKKVDLTLLSPKSEND 275
Query: 601 VVQRIS 618
++ IS
Sbjct: 276 KLKEIS 281
>AL031259-3|CAD92541.1| 177|Homo sapiens programmed cell death 2
protein.
Length = 177
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 292 LCGLHRLLVIQCYAPLEN--SVYHRTLYVFACINPNC 396
LCG ++Q YAPL +HR +++F C C
Sbjct: 2 LCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPC 38
>AB065479-1|BAC05733.1| 188|Homo sapiens seven transmembrane helix
receptor protein.
Length = 188
Score = 30.3 bits (65), Expect = 9.5
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -2
Query: 483 WYCNYCTCLFSLFIFIL 433
WYC++C+CL L +F++
Sbjct: 133 WYCSWCSCLLLLVLFLV 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,583,869
Number of Sequences: 237096
Number of extensions: 1925926
Number of successful extensions: 8372
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8332
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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