Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F24
         (1004 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein.                32   3.8  
CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.                25   6.3  
AF131750-1|AAD20033.1|  183|Homo sapiens Human DEAD-box protein ...    25   7.1  
Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.        31   8.7  
BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger ...    31   8.7  

>AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein.
          Length = 1584

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +3

Query: 585  AAXPXXXPPXXXXXXGGXXXXXXXXPPPPPPP 680
            A+ P   PP      GG        PPPPPPP
Sbjct: 1386 ASLPARSPPSRQPPSGGPPEAPPAQPPPPPPP 1417


>CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.
          Length = 652

 Score = 25.0 bits (52), Expect(2) = 6.3
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +3

Query: 606 PPXXXXXXGGXXXXXXXXPPPPPPP 680
           PP      G         PPPPPPP
Sbjct: 623 PPGATNMIGYMGQTAYQYPPPPPPP 647



 Score = 24.6 bits (51), Expect(2) = 6.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 660 PPPPPPPXXXK 692
           PPPPPPP   K
Sbjct: 642 PPPPPPPPSRK 652


>AF131750-1|AAD20033.1|  183|Homo sapiens Human DEAD-box protein p72
           protein.
          Length = 183

 Score = 25.0 bits (52), Expect(2) = 7.1
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +3

Query: 606 PPXXXXXXGGXXXXXXXXPPPPPPP 680
           PP      G         PPPPPPP
Sbjct: 154 PPGATNMIGYMGQTAYQYPPPPPPP 178



 Score = 24.6 bits (51), Expect(2) = 7.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 660 PPPPPPPXXXK 692
           PPPPPPP   K
Sbjct: 173 PPPPPPPPSRK 183


>Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 589 PXPPXXPPXXXXXXXGXXXXXXXXPPPPPXPXXXKXF 699
           P PP  PP       G        PPPPP P     F
Sbjct: 576 PLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNF 612


>BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger
           protein 162 protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 8.7
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 589 PXPPXXPPXXXXXXXGXXXXXXXXPPPPPXPXXXKXF 699
           P PP  PP       G        PPPPP P     F
Sbjct: 202 PLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNF 238


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,223,959
Number of Sequences: 237096
Number of extensions: 1872399
Number of successful extensions: 32391
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19488
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13433848218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)