Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F23
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    25   0.92 
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    25   0.92 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.7  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   6.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   8.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   8.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.6  

>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 202 FLRRAEHCMGKVAEAPESPVSKCVSSMSPIVV 107
           +LRR   C   + EAP  PV + + S++P+V+
Sbjct: 47  YLRRQLKCA--LGEAPCDPVGRRLKSLAPLVL 76


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 202 FLRRAEHCMGKVAEAPESPVSKCVSSMSPIVV 107
           +LRR   C   + EAP  PV + + S++P+V+
Sbjct: 47  YLRRQLKCA--LGEAPCDPVGRRLKSLAPLVL 76


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 66  RVLQPKAKS*GIPYSEIV 13
           R+L PK K  G+PY+ +V
Sbjct: 601 RLLLPKGKKEGMPYNVLV 618


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 66  RVLQPKAKS*GIPYSEIV 13
           R+L PK K  G+PY+ +V
Sbjct: 601 RLLLPKGKKEGMPYNVLV 618


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 121 TSKTHTSRPETPGPQ 165
           T   H   PETPGPQ
Sbjct: 462 TPHHHPHPPETPGPQ 476


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 303 DIFNGKKYEDIC 338
           D+ N +KYED+C
Sbjct: 597 DLSNERKYEDVC 608


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 268 FPVLDVDISTILHGR 224
           FPVL V I+ +LHG+
Sbjct: 8   FPVLFVIINVLLHGQ 22


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +1

Query: 247 CPHPKPESTATLKFTWLGLISSMVKSM 327
           CP   P        TWLG ++S +  +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +1

Query: 247 CPHPKPESTATLKFTWLGLISSMVKSM 327
           CP   P        TWLG ++S +  +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +1

Query: 247 CPHPKPESTATLKFTWLGLISSMVKSM 327
           CP   P        TWLG ++S +  +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 576 CFDGDDALLTAGFQHGAQQFLAA 508
           C D DD LL      G++   AA
Sbjct: 670 CLDDDDTLLEVALSLGSEALSAA 692


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,289
Number of Sequences: 438
Number of extensions: 5348
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)