Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F14
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X58288-1|CAA41226.1| 1452|Homo sapiens protein-tyrosine phosphat...    31   7.2  
BC130611-1|AAI30612.1|  942|Homo sapiens inturned planar cell po...    31   7.2  
BC051651-1|AAH51651.1| 1390|Homo sapiens PTPRM protein protein.        31   7.2  
AB033110-1|BAA86598.1|  953|Homo sapiens KIAA1284 protein protein.     31   7.2  

>X58288-1|CAA41226.1| 1452|Homo sapiens protein-tyrosine phosphatase
            protein.
          Length = 1452

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +2

Query: 506  QVERTYEALRGVDPRLDRRMPFSMFQHSMCTVLNAYIIDLTLDNGERKMDSARCQDLLPE 685
            QV   Y  +  +DP+ +       F+          + D ++    R  +  RC D+LP 
Sbjct: 1166 QVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPP 1225

Query: 686  DLCLP 700
            D CLP
Sbjct: 1226 DRCLP 1230


>BC130611-1|AAI30612.1|  942|Homo sapiens inturned planar cell
           polarity effector homolog (Drosophila) protein.
          Length = 942

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 497 YIDQVERTYEALRGVDPRLDRRMPFS 574
           Y+DQV+ T   L GVD R+D R+  S
Sbjct: 624 YVDQVKTTLHQLDGVDSRIDERLASS 649


>BC051651-1|AAH51651.1| 1390|Homo sapiens PTPRM protein protein.
          Length = 1390

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +2

Query: 506  QVERTYEALRGVDPRLDRRMPFSMFQHSMCTVLNAYIIDLTLDNGERKMDSARCQDLLPE 685
            QV   Y  +  +DP+ +       F+          + D ++    R  +  RC D+LP 
Sbjct: 1104 QVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPP 1163

Query: 686  DLCLP 700
            D CLP
Sbjct: 1164 DRCLP 1168


>AB033110-1|BAA86598.1|  953|Homo sapiens KIAA1284 protein protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 497 YIDQVERTYEALRGVDPRLDRRMPFS 574
           Y+DQV+ T   L GVD R+D R+  S
Sbjct: 635 YVDQVKTTLHQLDGVDSRIDERLASS 660


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,739,956
Number of Sequences: 237096
Number of extensions: 2436325
Number of successful extensions: 8777
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8777
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)