Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_E10
         (885 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              27   0.17 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.6  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 505 IIRVLNLWQKNNVFSPQVIQPLLDM 579
           I++  N+  KNNVF PQ I+ ++++
Sbjct: 66  ILKNFNILDKNNVFKPQGIKAVMEL 90


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
 Frame = +1

Query: 304 VVHSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRC 483
           ++ S   +I K   EY+    ++ D ++  +  ++   + + AP F  N+ ++F +LF  
Sbjct: 101 IILSSNVYIDK-STEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLFNA 159

Query: 484 PAEDKRNIIRVLN--LWQKNNVFSPQVIQPLLDMA 582
            A      +R  N   +  +N  S   +  LL+ A
Sbjct: 160 NARSVVEKMRKENGKEFDCHNYMSELTVDILLETA 194


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,929
Number of Sequences: 438
Number of extensions: 4000
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)