Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_E09
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   101   1e-23
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    51   2e-08
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   8.6  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  101 bits (241), Expect = 1e-23
 Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
 Frame = +2

Query: 293 EKRGVPFKKPIIFLGNLGPRLKAAKSFHQYQLDIYQYFKGHPYGGTFDGRRPVLHILDPE 472
           + RGV   KP+ F G     +   KS   +  DIY+ +K  P  G +  R P L + DPE
Sbjct: 30  KSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDPE 89

Query: 473 LIKAIMIRDFDHFTDRNTLNSMEPRYLSRSLLNLKGLEWKGVRSTLTPAFSSSRLKNMIP 652
           LIK I+IRDF  F +R          LS  LLNL+   W+ +RS L+P F+S +LK M  
Sbjct: 90  LIKDILIRDFSKFANRGLGVFERTEPLSPHLLNLEVERWRPLRSRLSPIFTSGKLKEMFY 149

Query: 653 LIQQCSKQMVEFLRKFDGKE--IEMKQTMGHFTLEVI 757
           LI +CS  +  +L K   K   IE ++    FT +VI
Sbjct: 150 LIIECSLNLETYLDKLIEKNEPIECRELTARFTTDVI 186



 Score = 27.1 bits (57), Expect = 0.23
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 759 GACAFGIKCDALSNENHDLSK 821
           G+CAFGI   +++NEN +  +
Sbjct: 187 GSCAFGIDMSSMTNENSEFRR 207


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 50.8 bits (116), Expect = 2e-08
 Identities = 28/107 (26%), Positives = 55/107 (51%)
 Frame = +2

Query: 437 GRRPVLHILDPELIKAIMIRDFDHFTDRNTLNSMEPRYLSRSLLNLKGLEWKGVRSTLTP 616
           G + V+ ++DP  ++ I+  +   + D++T       +L   LL   G +W+  R  + P
Sbjct: 86  GPKLVICLIDPRDVEIILSSNV--YIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAP 143

Query: 617 AFSSSRLKNMIPLIQQCSKQMVEFLRKFDGKEIEMKQTMGHFTLEVI 757
            F  + LK+ I L    ++ +VE +RK +GKE +    M   T++++
Sbjct: 144 TFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELTVDIL 190


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 535 TVQSVTVSKMIKIPDHY 485
           +++SVTV K+I   DH+
Sbjct: 449 SIESVTVDKLITYFDHF 465


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 535 TVQSVTVSKMIKIPDHY 485
           +++SVTV K+I   DH+
Sbjct: 449 SIESVTVDKLITYFDHF 465


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 535 TVQSVTVSKMIKIPDHY 485
           +++SVTV K+I   DH+
Sbjct: 75  SIESVTVDKLITYFDHF 91


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 402 YW*ISNWYW*NDFAAFKRGPRFPRKIIGF 316
           Y+ +S WYW +  +A+K   R  + +  F
Sbjct: 276 YYVMSLWYWIDRNSAYKIDQRIQKGLFLF 304


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,854
Number of Sequences: 438
Number of extensions: 3614
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)