Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_E03
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   5.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   5.0  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        23   5.0  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   6.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   6.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   6.6  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 667 IEAAVDMLANIISALTISGYAFRIAFAIAPPQSCETKMHFSRP 539
           I A V  +++ +S LTI  ++     AI  P    T     RP
Sbjct: 116 IRAYVSEMSSYVSVLTIVAFSMERYLAICHPLRVYTISGLKRP 158


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 836 HSTSCLSTYVLPGTSNILSCISRSFI 759
           + T     Y + G S IL C+  SF+
Sbjct: 105 YDTDVNKEYAIRGNSAILKCVVPSFV 130


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 318 YVESGDPSKPLMIFLH 365
           Y  S D SKP+M ++H
Sbjct: 10  YTNSLDQSKPVMFYVH 25


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 594 HSLSHLPSHARLKCTSHD 541
           H L++  SH RL C   D
Sbjct: 76  HGLTNTASHTRLSCDCDD 93


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 594 HSLSHLPSHARLKCTSHD 541
           H L++  SH RL C   D
Sbjct: 81  HGLTNTASHTRLSCDCDD 98


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 594 HSLSHLPSHARLKCTSHD 541
           H L++  SH RL C   D
Sbjct: 81  HGLTNTASHTRLSCDCDD 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,111
Number of Sequences: 438
Number of extensions: 4845
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)