Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D07
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   4.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   4.9  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   4.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   4.9  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   6.5  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   8.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = +1

Query: 160 QXMLAITSTTLGLAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRER 297
           +  L+  +  +GLA   A     GY    +QQ+++ PL +++ +++
Sbjct: 206 EQQLSYFTQDIGLAAYYAQVNLAGYIQEQNQQQQQQPLTQQQYQQQ 251


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 788 CFGRFKTMK 762
           CFG++KTMK
Sbjct: 122 CFGKYKTMK 130


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 788 CFGRFKTMK 762
           CFG++KTMK
Sbjct: 122 CFGKYKTMK 130


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 196 LAVGIAGTLFLGYCVYF 246
           +AVG +G +F GY + F
Sbjct: 235 IAVGASGNVFAGYLLVF 251


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 558 QLLKKQMEDWSWHSLLKYTKQLFSLSTNSH 469
           QLL K ME   W S+++    +  + T+SH
Sbjct: 74  QLLPKLMEFDDWTSVMELHSWMTLMWTDSH 103


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -2

Query: 665 FYFHLFKYTIFYSTSSSCITLLLAFI 588
           FY  + + T+FY+ +    T+L++F+
Sbjct: 225 FYIIIRRKTLFYTVNLILPTVLISFL 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,291
Number of Sequences: 438
Number of extensions: 3629
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)