Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D02
         (921 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.             33   1.5  
BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.       33   1.5  
AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.           33   1.5  
U29343-1|AAC52049.1|  725|Homo sapiens hyaluronan receptor protein.    32   3.4  
AK025085-1|BAB15062.1|  258|Homo sapiens protein ( Homo sapiens ...    32   3.4  

>X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.
          Length = 862

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
 Frame = +2

Query: 446 LNKDVLNVKQSL---EDAMKE--TSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQN 610
           + K++  +K  L   ED +KE   S      H L+++K         +  LNT  +VLQ 
Sbjct: 191 MEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE 250

Query: 611 ITEQ---KMYDKIVLADRAAMQYNQLKFTIKKCDN 706
             E+   ++++   L ++   Q+NQLK T +K ++
Sbjct: 251 DAEKLRKELHEVCHLLEQERQQHNQLKHTWQKAND 285


>BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.
          Length = 862

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
 Frame = +2

Query: 446 LNKDVLNVKQSL---EDAMKE--TSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQN 610
           + K++  +K  L   ED +KE   S      H L+++K         +  LNT  +VLQ 
Sbjct: 191 MEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE 250

Query: 611 ITEQ---KMYDKIVLADRAAMQYNQLKFTIKKCDN 706
             E+   ++++   L ++   Q+NQLK T +K ++
Sbjct: 251 DAEKLRKELHEVCHLLEQERQQHNQLKHTWQKAND 285


>AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.
          Length = 829

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
 Frame = +2

Query: 446 LNKDVLNVKQSL---EDAMKE--TSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQN 610
           + K++  +K  L   ED +KE   S      H L+++K         +  LNT  +VLQ 
Sbjct: 191 MEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE 250

Query: 611 ITEQ---KMYDKIVLADRAAMQYNQLKFTIKKCDN 706
             E+   ++++   L ++   Q+NQLK T +K ++
Sbjct: 251 DAEKLRKELHEVCHLLEQERQQHNQLKHTWQKAND 285


>U29343-1|AAC52049.1|  725|Homo sapiens hyaluronan receptor protein.
          Length = 725

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 28/94 (29%), Positives = 45/94 (47%)
 Frame = +2

Query: 440 KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQNITE 619
           K+ N ++L++KQSLED +   S    Q  +L  K QLL+   +   + N   N   N   
Sbjct: 263 KEKNDEILSLKQSLEDNIVILS---KQVEDLNVKCQLLETEKEDHVNRNREHNENLNAEM 319

Query: 620 QKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLE 721
           Q +  K +L  R   +  Q +  I   D+L++ E
Sbjct: 320 QNLEQKFILEQREHEKLQQKELQI---DSLLQQE 350


>AK025085-1|BAB15062.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21432 fis, clone COL04219. ).
          Length = 258

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = -1

Query: 801 PSFQNWNSNSFKVLTSVSSI*VNCVLCSSFTKLSHFFMVNFN*LYCIAALSASTILSYIF 622
           PSF+    + F++ T   +I  + + C SF  L  F+M   N +  +A L    +    F
Sbjct: 2   PSFRACFKSIFRIHTETGNIWTHLLGCVSFLCLGIFYMFRPN-ISFVAPLQEKVVFGLFF 60

Query: 621 CSVIFCKTLS 592
              I C + S
Sbjct: 61  LGAILCLSFS 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,946,230
Number of Sequences: 237096
Number of extensions: 1389834
Number of successful extensions: 2890
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2890
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)