Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C20
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.94 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   5.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   8.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   8.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 312  SATLFRPFSARARYVLKDKQGLSILKGNPGPGGSSFPWLTNG 187
            +AT  RP +A  +  LK ++  +   G PGP G   P    G
Sbjct: 1111 AATNIRPGTADNKPQLKPQKPFTSPGGIPGPNGIKMPSFMEG 1152


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 502 YSLYGLIQLKWF 467
           YSL+G+I + WF
Sbjct: 204 YSLFGMIMMYWF 215


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 264 KDKQGLSILKGNPGPGG 214
           KDK   + + G+PG GG
Sbjct: 276 KDKPNSTTMNGSPGSGG 292


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -1

Query: 348 VICDRERSFRTLSATLFRPFSARARYVLKDKQGLSILKGNPGPGGSSFPWLT 193
           ++  R R  R+L    F P    A+Y   +++  S L G  G    +F  LT
Sbjct: 103 IVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLT 154


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -1

Query: 348 VICDRERSFRTLSATLFRPFSARARYVLKDKQGLSILKGNPGPGGSSFPWLT 193
           ++  R R  R+L    F P    A+Y   +++  S L G  G    +F  LT
Sbjct: 119 IVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLT 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,669
Number of Sequences: 438
Number of extensions: 4222
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)