Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C06
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   8.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.6  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 710 LTIRTPGKPVDLHMG*NYGDETQDGY 787
           L IR PG+P   H G  +G E ++G+
Sbjct: 78  LNIR-PGQPSRQHAGFEFGKEYKNGF 102


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 805 FTSTVSVAVLCFISIISTHVQINRFAWSSNG 713
           FT+ ++ A LC  S I +        W S G
Sbjct: 7   FTTLINAAFLCLASTILSESAGTSCKWLSEG 37


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 658 GPPKPCRCAN*CL 696
           G P+PCRC   C+
Sbjct: 474 GLPEPCRCHARCI 486


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 548 FDIARNKSLEVLESMKIPIEVARE 619
           F  AR ++  V E  ++PIE+ R+
Sbjct: 161 FSRAREEANVVPEGARVPIEIPRD 184


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 658 GPPKPCRCAN*CL 696
           G P+PCRC   C+
Sbjct: 474 GLPEPCRCHARCI 486


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,758
Number of Sequences: 438
Number of extensions: 4773
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)