Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C05
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL591069-1|CAI16539.1|  556|Homo sapiens solute carrier family 2...    31   4.3  
AL355506-1|CAI20340.1|  556|Homo sapiens solute carrier family 2...    31   4.3  
AJ403946-1|CAC39443.1|  557|Homo sapiens organic cation transpor...    31   4.3  
AJ001417-1|CAA04751.1|  556|Homo sapiens extraneuronal monoamine...    31   4.3  
AJ251884-1|CAB96132.1|  143|Homo sapiens extraneuronal monoamine...    31   5.6  
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        30   9.9  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        30   9.9  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       30   9.9  

>AL591069-1|CAI16539.1|  556|Homo sapiens solute carrier family 22
           (extraneuronal monoamined) (PLP2) pseudogene protein.
          Length = 556

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 707 SSLXALSCSDPAAYRIPVRLSPL---REAWRFLIAHAVGISXRXXSXAPSW 850
           S+  ALSC+DP A   P R +PL   R  WR+  AH+  +S        +W
Sbjct: 103 SATSALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEFDLVCVNAW 152


>AL355506-1|CAI20340.1|  556|Homo sapiens solute carrier family 22
           (extraneuronal monoaminen 1 protein.
          Length = 556

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 707 SSLXALSCSDPAAYRIPVRLSPL---REAWRFLIAHAVGISXRXXSXAPSW 850
           S+  ALSC+DP A   P R +PL   R  WR+  AH+  +S        +W
Sbjct: 103 SATSALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEFDLVCVNAW 152


>AJ403946-1|CAC39443.1|  557|Homo sapiens organic cation transporter
           3 protein.
          Length = 557

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 707 SSLXALSCSDPAAYRIPVRLSPL---REAWRFLIAHAVGISXRXXSXAPSW 850
           S+  ALSC+DP A   P R +PL   R  WR+  AH+  +S        +W
Sbjct: 103 SATSALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEFDLVCVNAW 152


>AJ001417-1|CAA04751.1|  556|Homo sapiens extraneuronal monoamine
           transporter protein.
          Length = 556

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 707 SSLXALSCSDPAAYRIPVRLSPL---REAWRFLIAHAVGISXRXXSXAPSW 850
           S+  ALSC+DP A   P R +PL   R  WR+  AH+  +S        +W
Sbjct: 103 SATSALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEFDLVCVNAW 152


>AJ251884-1|CAB96132.1|  143|Homo sapiens extraneuronal monoamine
           transporter (EMT) protein.
          Length = 143

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +2

Query: 707 SSLXALSCSDPAAYRIPVRLSPL---REAWRFLIAHAVGIS 820
           S+  ALSC+DP A   P R +PL   R  WR+  AH+  +S
Sbjct: 103 SATSALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVS 142


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 770 EKGGQVSGKRQGRNRRAXRGSFPGGNA 690
           EKG +VSGKR+GRN  A   S    +A
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASA 29


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 770 EKGGQVSGKRQGRNRRAXRGSFPGGNA 690
           EKG +VSGKR+GRN  A   S    +A
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASA 29


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 770 EKGGQVSGKRQGRNRRAXRGSFPGGNA 690
           EKG +VSGKR+GRN  A   S    +A
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASA 29


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,966,960
Number of Sequences: 237096
Number of extensions: 2246152
Number of successful extensions: 5376
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5363
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)