Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C01
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    32   0.62 
Z50027-1|CAA90331.1|  583|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U70847-2|AAB09105.2|  185|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical...    28   7.6  
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    28   7.6  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 617 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 739
           Y+  R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>Z50027-1|CAA90331.1|  583|Caenorhabditis elegans Hypothetical
           protein C39B10.1 protein.
          Length = 583

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = -3

Query: 547 YGKTPATRPFYGFLAFCWPFASHVLSCVIP*FLWITVLPPLSELIPLAAAER 392
           Y  TP   PF   L F  PFAS  +SC I     IT+   L+   PL    R
Sbjct: 108 YSVTPIYGPFSYILFFLQPFASFCVSCTIWQVFAITLERYLAVSSPLEQRTR 159


>AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical
           protein H06I04.3a protein.
          Length = 833

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 203 KARSSTKGNKEKQXXHCKDEGGGXAKRKQGSGAGTGXK 90
           KA+  TKG   K+    K  GGG  + + G G G G +
Sbjct: 796 KAKEKTKGRGGKRGIPKKTGGGGGGRGRGGGGRGGGRR 833


>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
            W04A8.7 protein.
          Length = 1792

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 221  EKXXQRKARSSTKGNKEKQXXHCKDEGGGXAKRKQGSGAGTG 96
            EK  ++ A+ +    +E+Q  H  + GGG +      G G+G
Sbjct: 1342 EKLKRKLAKMAEAAVRERQMAHLMEYGGGASSSGGAGGGGSG 1383


>U70847-2|AAB09105.2|  185|Caenorhabditis elegans Hypothetical
           protein K09B3.1 protein.
          Length = 185

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 503 LLLAFCFTCSFLRYPL 456
           LLLA CF+CSF +Y L
Sbjct: 6   LLLALCFSCSFAQYGL 21


>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
            protein W04A8.7 protein.
          Length = 1792

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 221  EKXXQRKARSSTKGNKEKQXXHCKDEGGGXAKRKQGSGAGTG 96
            EK  ++ A+ +    +E+Q  H  + GGG +      G G+G
Sbjct: 1342 EKLKRKLAKMAEAAVRERQMAHLMEYGGGASSSGGAGGGGSG 1383


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = -3

Query: 793 HSPAWSERXTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQGETPGIF 620
           H  AW+ R  P    ++ +  K  ++ K E + G     G+E+       +G+T   F
Sbjct: 96  HDKAWNNRSLPQKSRWNQASVKLAQYQKAEEKMGFIKVFGTEEFQNYSKRRGQTRNSF 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,394,051
Number of Sequences: 27780
Number of extensions: 303291
Number of successful extensions: 892
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)