SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B22
         (898 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12404-1|AAA86463.1|  217|Homo sapiens Csa-19 protein.                120   7e-27
BT020041-1|AAV38844.1|  217|Homo sapiens ribosomal protein L10a ...   120   7e-27
BT020040-1|AAV38843.1|  217|Homo sapiens ribosomal protein L10a ...   120   7e-27
BC070216-1|AAH70216.1|  217|Homo sapiens ribosomal protein L10a ...   120   7e-27
BC011366-1|AAH11366.1|  217|Homo sapiens ribosomal protein L10a ...   120   7e-27
BC006791-1|AAH06791.1|  217|Homo sapiens ribosomal protein L10a ...   120   7e-27
AL022721-5|CAB38627.1|  217|Homo sapiens ribosomal protein L10a ...   120   7e-27
AB082926-1|BAC16802.1|  217|Homo sapiens ribosomal protein L10a ...   120   7e-27
BC116456-1|AAI16457.1|  206|Homo sapiens RPL10A protein protein.      119   1e-26

>U12404-1|AAA86463.1|  217|Homo sapiens Csa-19 protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLVKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>BT020041-1|AAV38844.1|  217|Homo sapiens ribosomal protein L10a
           protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>BT020040-1|AAV38843.1|  217|Homo sapiens ribosomal protein L10a
           protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>BC070216-1|AAH70216.1|  217|Homo sapiens ribosomal protein L10a
           protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>BC011366-1|AAH11366.1|  217|Homo sapiens ribosomal protein L10a
           protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>BC006791-1|AAH06791.1|  217|Homo sapiens ribosomal protein L10a
           protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>AL022721-5|CAB38627.1|  217|Homo sapiens ribosomal protein L10a
           protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217


>AB082926-1|BAC16802.1|  217|Homo sapiens ribosomal protein L10a
           protein.
          Length = 217

 Score =  120 bits (289), Expect = 7e-27
 Identities = 61/113 (53%), Positives = 69/113 (61%)
 Frame = +2

Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
           A+  VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQ
Sbjct: 13  AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72

Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           HCDEAK +++P M                           SESLIKQIPR +G
Sbjct: 73  HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190



 Score = 50.8 bits (116), Expect = 7e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KS MG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSPMGKPQRLY 217


>BC116456-1|AAI16457.1|  206|Homo sapiens RPL10A protein protein.
          Length = 206

 Score =  119 bits (287), Expect = 1e-26
 Identities = 60/110 (54%), Positives = 68/110 (61%)
 Frame = +2

Query: 143 AVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCD 322
           +VL  ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK  PRPK  VCVLGDQQHCD
Sbjct: 5   SVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCD 64

Query: 323 EAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
           EAK +++P M                           SESLIKQIPR +G
Sbjct: 65  EAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 114



 Score =  118 bits (283), Expect = 4e-26
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
           + P +LGPGLNKAGKFP LL+H E+M  K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 108 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 167

Query: 633 LAQNVHLSINFL 668
           L  N+HL++NFL
Sbjct: 168 LVYNIHLAVNFL 179



 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1

Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
           LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 179 LVSLLKKNWQNVRALYIKSTMGKPQRLY 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,003,164
Number of Sequences: 237096
Number of extensions: 2395600
Number of successful extensions: 10196
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10187
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -