BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_B22
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein. 120 7e-27
BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a ... 120 7e-27
BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a ... 120 7e-27
BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a ... 120 7e-27
BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a ... 120 7e-27
BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a ... 120 7e-27
AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a ... 120 7e-27
AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a ... 120 7e-27
BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein. 119 1e-26
>U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLVKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 120 bits (289), Expect = 7e-27
Identities = 61/113 (53%), Positives = 69/113 (61%)
Frame = +2
Query: 134 ALXAVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQ 313
A+ VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQ
Sbjct: 13 AVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQ 72
Query: 314 HCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
HCDEAK +++P M SESLIKQIPR +G
Sbjct: 73 HCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 125
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 119 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 178
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 179 LVYNIHLAVNFL 190
Score = 50.8 bits (116), Expect = 7e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KS MG PQRLY
Sbjct: 190 LVSLLKKNWQNVRALYIKSPMGKPQRLY 217
>BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein.
Length = 206
Score = 119 bits (287), Expect = 1e-26
Identities = 60/110 (54%), Positives = 68/110 (61%)
Frame = +2
Query: 143 AVLQSSKDKXRNFLEXVXLQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCD 322
+VL ++ K R FLE V LQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCD
Sbjct: 5 SVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCD 64
Query: 323 EAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 472
EAK +++P M SESLIKQIPR +G
Sbjct: 65 EAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILG 114
Score = 118 bits (283), Expect = 4e-26
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 453 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 632
+ P +LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DE
Sbjct: 108 QIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDE 167
Query: 633 LAQNVHLSINFL 668
L N+HL++NFL
Sbjct: 168 LVYNIHLAVNFL 179
Score = 53.2 bits (122), Expect = 1e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 667 LVSLLKKHWQNVRSLHMKSTMGPPQRLY 750
LVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 179 LVSLLKKNWQNVRALYIKSTMGKPQRLY 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,003,164
Number of Sequences: 237096
Number of extensions: 2395600
Number of successful extensions: 10196
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10187
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -