Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_B18
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 55 4e-07
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 55 4e-07
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 55 4e-07
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 55 4e-07
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 55 4e-07
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 55 4e-07
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 55 4e-07
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 52 3e-06
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 33 1.3
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 33 1.3
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 33 1.3
BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open readi... 33 1.3
BC009074-1|AAH09074.1| 325|Homo sapiens chromosome 8 open readi... 33 1.3
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 33 1.3
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 33 1.3
AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open readi... 33 1.3
AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 33 1.3
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 33 1.3
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 33 1.3
AF151820-1|AAD34057.1| 325|Homo sapiens CGI-62 protein protein. 33 1.8
BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein. 31 5.4
AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegat... 31 5.4
AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegat... 31 5.4
AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegat... 31 5.4
BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein. 30 9.5
AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein. 30 9.5
AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein. 30 9.5
AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor int... 30 9.5
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ILWG
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 569
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 570 TAL 578
+AL
Sbjct: 78 SAL 80
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 268 GPPGCGKTTLAHIIASNSKKHSIRFV 293
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ILWG
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 48
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 48 GPPGCGKTTLAHIIASNSKKHSIRFV 73
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ILWG
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 569
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 570 TAL 578
+AL
Sbjct: 78 SAL 80
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 268 GPPGCGKTTLAHIIASNSKKHSIRFV 293
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ILWG
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 569
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 570 TAL 578
+AL
Sbjct: 78 SAL 80
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 268 GPPGCGKTTLAHIIASNSKKHSIRFV 293
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ILWG
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 268
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 569
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 570 TAL 578
+AL
Sbjct: 78 SAL 80
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 268 GPPGCGKTTLAHIIASNSKKHSIRFV 293
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ILWG
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 48
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 48 GPPGCGKTTLAHIIASNSKKHSIRFV 73
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ILWG
Sbjct: 207 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWG 249
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 569
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 3 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 62
Query: 570 TAL 578
+AL
Sbjct: 63 SAL 65
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 249 GPPGCGKTTLAHIIASNSKKHSIRFV 274
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/43 (46%), Positives = 33/43 (76%)
Frame = +3
Query: 639 PLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
PL++++RP +L GQ ++ G D++LRS+LE N+IP++ LWG
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWG 268
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 569
V CP+C + I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 570 TAL 578
+AL
Sbjct: 78 SAL 80
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 764 GSPGCGKTSLANVISNICKNKXXKFV 841
G PGCGKT+LA++I++ K +FV
Sbjct: 268 GPPGCGKTTLAHIIASNSKKHSIRFV 293
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 185 FYGPPGCGKTLLAKAIANECQ 205
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 516 FYGPPGCGKTLLAKAIANECQ 536
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 516 FYGPPGCGKTLLAKAIANECQ 536
>BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 393 SDCTKTVNCPICNRSFENTEIEEHVNKCL 479
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>BC009074-1|AAH09074.1| 325|Homo sapiens chromosome 8 open reading
frame 70 protein.
Length = 325
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNL 590
+ CP C R F + H+N C + SN + R +V K PP L
Sbjct: 120 IQCPYCQRRFNENAADRHINFCK-EQAARISNKGKFSADTKGKPTSRTQVYK----PPAL 174
Query: 591 KSSQSQKISTNENIKIP 641
K S S +++ + ++P
Sbjct: 175 KKSNSPGTASSGSSRLP 191
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 354 FYGPPGCGKTLLAKAIANECQ 374
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 516 FYGPPGCGKTLLAKAIANECQ 536
>AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 393 SDCTKTVNCPICNRSFENTEIEEHVNKCL 479
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ14707 fis, clone NT2RP3000599. ).
Length = 489
Score = 33.1 bits (72), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 393 SDCTKTVNCPICNRSFENTEIEEHVNKCL 479
S +K VNCP+C ++I EH++ CL
Sbjct: 448 SSQSKMVNCPVCQNEVLESQINEHLDWCL 476
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 144 FYGPPGCGKTLLAKAIANECQ 164
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 516 FYGPPGCGKTLLAKAIANECQ 536
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 516 FYGPPGCGKTLLAKAIANECQ 536
>AF151820-1|AAD34057.1| 325|Homo sapiens CGI-62 protein protein.
Length = 325
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNL 590
+ CP C R F + H+N C + SN R +V K PP L
Sbjct: 120 IQCPYCQRRFNENAADRHINFCK-EQAARISNEGEFSTDTKGKPSSRTQVYK----PPAL 174
Query: 591 KSSQSQKISTNENIKIP 641
K S S +++ + ++P
Sbjct: 175 KKSNSPGTASSGSSRLP 191
>BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein.
Length = 230
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 526 CCPCLFELDFSHELRKRHLFTCSSISVFSKLL 431
C PCL LD EL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 175
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 526 CCPCLFELDFSHELRKRHLFTCSSISVFSKLL 431
C PCL LD EL ++ TC SI + + L
Sbjct: 2 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 33
>AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 410
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 526 CCPCLFELDFSHELRKRHLFTCSSISVFSKLL 431
C PCL LD EL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 230
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 526 CCPCLFELDFSHELRKRHLFTCSSISVFSKLL 431
C PCL LD EL ++ TC SI + + L
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGITKRNL 44
>BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein.
Length = 553
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 518
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 337 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 372
>AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein.
Length = 349
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 518
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
>AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein.
Length = 641
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 518
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 425 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 460
>AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor
interacting protein protein.
Length = 349
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 VNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQ 518
V+CP+C++ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,689,138
Number of Sequences: 237096
Number of extensions: 2194428
Number of successful extensions: 12773
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12770
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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