Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B13
         (866 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ406951-1|CAC27590.1|  154|Homo sapiens keratin associated prot...    31   5.4  
BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated prot...    30   9.5  
AY672837-1|AAT77412.1|  546|Homo sapiens immunoglobulin-like dom...    30   9.5  
AY134857-1|AAN10256.1|  265|Homo sapiens unknown protein.              30   9.5  
AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency ...    30   9.5  
AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency ...    30   9.5  
AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated prot...    30   9.5  
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom...    30   9.5  
AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.     30   9.5  

>AJ406951-1|CAC27590.1|  154|Homo sapiens keratin associated protein
           9.9 protein.
          Length = 154

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 205 CCCYCWNPCAKPACCSNEYWCYTRHRPT 288
           C   C  PC +PACC N     T  +PT
Sbjct: 43  CVSSCCQPCCRPACCQNTCCRTTCCQPT 70


>BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated protein
           9-2 protein.
          Length = 174

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 199 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 363
           THCC    +PC +P CC       T  +PT  +T   T+  +   C+    + C  P
Sbjct: 2   THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54


>AY672837-1|AAT77412.1|  546|Homo sapiens immunoglobulin-like
           domain-containing receptor 1 alpha protein.
          Length = 546

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 202 HCCCYCWNPCAKPACCSNEYWCYTRHR 282
           +CCCY   PC    CC  E     RHR
Sbjct: 196 YCCCYIRCPCCPAHCCCPEE-ALARHR 221


>AY134857-1|AAN10256.1|  265|Homo sapiens unknown protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 202 HCCCYCWNPCAKPACCSNEYWCYTRHR 282
           +CCCY   PC    CC  E     RHR
Sbjct: 196 YCCCYIRCPCCPAHCCCPEE-ALARHR 221


>AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 3 protein.
          Length = 2406

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 202 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 351
           + C YC  PCAKP+        +T  RP        + + +  LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241


>AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 3 protein.
          Length = 2405

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 202 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 351
           + C YC  PCAKP+        +T  RP        + + +  LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241


>AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated protein
           9.2 protein.
          Length = 174

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 199 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 363
           THCC    +PC +P CC       T  +PT  +T   T+  +   C+    + C  P
Sbjct: 2   THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54


>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
           recombination signal sequences binding protein protein.
          Length = 2406

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 202 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 351
           + C YC  PCAKP+        +T  RP        + + +  LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241


>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
          Length = 2414

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 202 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 351
           + C YC  PCAKP+        +T  RP        + + +  LY+ R++
Sbjct: 201 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 250


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,467,689
Number of Sequences: 237096
Number of extensions: 1198722
Number of successful extensions: 2119
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2085
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)