Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B06
         (866 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ...    33   1.3  
AC002398-4|AAB81198.1|  903|Homo sapiens F25965_3 protein.             33   1.3  

>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45322 fis, clone BRHIP3006294, moderately
           similar to Mus musculus Cdc42 GTPase-activating protein
           (Cdgap). ).
          Length = 1007

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +3

Query: 81  LHIADRMSQIAEEQKLEESDGLPPASSS 164
           L +A+R  Q+AE+Q  +E  G PPAS S
Sbjct: 766 LALAERAQQVAEQQSQQECGGTPPASQS 793


>AC002398-4|AAB81198.1|  903|Homo sapiens F25965_3 protein.
          Length = 903

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +3

Query: 81  LHIADRMSQIAEEQKLEESDGLPPASSS 164
           L +A+R  Q+AE+Q  +E  G PPAS S
Sbjct: 518 LALAERAQQVAEQQSQQECGGTPPASQS 545


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,322,406
Number of Sequences: 237096
Number of extensions: 1676440
Number of successful extensions: 4869
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4864
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)