Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_A04
(874 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 33 0.005
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 27 0.23
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 26 0.39
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.69
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 25 0.91
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 24 2.1
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 3.7
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 4.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.4
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 8.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 8.5
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 32.7 bits (71), Expect = 0.005
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 573 HYPQNPQHAQNVSHHTQNVPQHAQN-APQHSQTLPQHSQPVSHYQPSHNSTIPQNRYQNN 749
+Y N + + +SH P+ N P SQ ++ P Q S +N +Q
Sbjct: 41 NYINNFETSNGISHQESGQPKQVDNETPVVSQGSDSYTAPDGQ-QVSITYVADENGFQVQ 99
Query: 750 TISPKRISDTNTKITRSILW-AIRPEXGSSGQPRSVGSG 863
+I R++ W A PE GQPR G G
Sbjct: 100 GSHIPTAPPIPPEIQRALEWNAAHPEEDDGGQPRPPGRG 138
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 27.1 bits (57), Expect = 0.23
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 624 NVPQHAQNAPQHSQTLPQHSQPVSHYQPSHN 716
+ PQ Q Q Q Q Q ++HY HN
Sbjct: 1445 SAPQQPQQQQQQQQQQQQQQQQLNHYPDLHN 1475
Score = 27.1 bits (57), Expect = 0.23
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 561 QSLPHYPQNPQHAQNVSHHTQNVPQHAQNAPQHSQTLPQHSQP 689
Q P Q Q Q +Q PQ Q PQ Q Q QP
Sbjct: 1502 QQQPQQQQQQQQQQQPQQQSQQ-PQQQQPQPQQQQQQQQQQQP 1543
Score = 25.4 bits (53), Expect = 0.69
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 582 QNPQHAQNVSHHTQNVPQHAQNAPQHSQTLPQHSQPVSHYQ 704
Q Q Q Q PQ PQ Q PQ Q Q
Sbjct: 1501 QQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQ 1541
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 669 LPQHSQPVSHYQPSHNSTIPQNRYQNNTISPKRISDTNTKI 791
LP P+ QP +S P ++ + + PK D N +
Sbjct: 489 LPPREAPLVGVQPHQDSATPADQPLDLSAKPKNSQDNNISL 529
Score = 24.2 bits (50), Expect = 1.6
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 588 PQHAQNVSHHTQNVPQ-HAQNAPQHSQTLPQHSQPVSHYQ 704
P H Q + HH PQ AQ PQ Q Q QP Q
Sbjct: 809 PPH-QQLHHHQSTHPQAQAQAQPQQQQQ-QQQQQPQQQQQ 846
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +3
Query: 582 QNPQHAQNVSHHTQNVPQHAQNAPQHSQTLPQHSQ 686
Q H QN HH Q+ + P Q Q Q
Sbjct: 139 QRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQ 173
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 26.2 bits (55), Expect = 0.39
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 204 VADDPETLRIKANTKIISNVAYHGDLEK 287
VA + +TL++ + KII N+AY G + +
Sbjct: 345 VAQNEKTLQMIISVKIIQNLAYSGRMNR 372
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.4 bits (53), Expect = 0.69
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +3
Query: 603 NVSHHTQNVPQHAQNAPQHSQTLPQHSQPVSHYQPSHNSTIPQNRYQNN 749
N + N H N +HS + H +H+S+ NR+ NN
Sbjct: 416 NFDNQDNNHYNHNHNQARHSSKSDNQNNN-QHNDQAHHSSKSNNRHNNN 463
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 25.0 bits (52), Expect = 0.91
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 494 LHPTSTQSQPESIEQPKCVAARTESAPLPPKPPARSERFPSHP 622
L + QS P K + LPP PP R + PS P
Sbjct: 610 LKTDTNQSCPSPPVTTKRDGTQETEERLPPLPPKRIRKMPSMP 652
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 358 LSGGGTSTISPFSLICLCLSIWAFFSRSPWYATLLMIFVFALI 230
L GGG + L +CL+ W+F +T+L+ F+ +I
Sbjct: 375 LKGGGGYLLGIQCLTVVCLAFWSFI-----VSTILLWFINKII 412
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 204 VADDPETLRIKANTKIISN 260
+ DPETL+ + KIIS+
Sbjct: 349 IVKDPETLQFPSGMKIISS 367
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 610 PITPKTYPNTLKMHPSTAKPYPN 678
P+T T P K +PYPN
Sbjct: 211 PVTLTTVPKHSKTKSPKLRPYPN 233
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 6.4
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = +3
Query: 765 RISDTNTKITRSILWAI 815
++++TN K+ RS+L+ I
Sbjct: 673 KLTETNPKLARSVLYKI 689
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 6.4
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 491 TLHPTSTQSQPES-IEQPKCVAARTESAPLPPKPP 592
T S Q Q ++ K V E+APLPP P
Sbjct: 1081 TAGTVSQQKQKRRMVKYGKLVMIHEENAPLPPALP 1115
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.5
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +2
Query: 572 PLPPKPPARSER--FPSHPKRTP 634
PLPP PP R F + K TP
Sbjct: 374 PLPPPPPIRGGEWTFDTLRKTTP 396
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 8.5
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 579 PQNPQHAQNVSHH---TQNVPQHAQNAPQHSQTLPQHSQ 686
P +P ++ HH TQ+ Q SQ QH Q
Sbjct: 158 PDSPPLVESQMHHQMHTQHPHMQPQQGQHQSQAQQQHLQ 196
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,632
Number of Sequences: 438
Number of extensions: 4596
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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