Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P24
         (917 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015168-1|AAH15168.2|  293|Homo sapiens ELMO/CED-12 domain cont...   155   2e-37
BC028725-1|AAH28725.3|  334|Homo sapiens ELMO/CED-12 domain cont...   141   4e-33

>BC015168-1|AAH15168.2|  293|Homo sapiens ELMO/CED-12 domain
           containing 2 protein.
          Length = 293

 Score =  155 bits (376), Expect = 2e-37
 Identities = 91/227 (40%), Positives = 128/227 (56%), Gaps = 3/227 (1%)
 Frame = +3

Query: 183 LFYNIWTVLQW-YVRPILKWFLRKTTRLCELQRICYGDIAGAQRTRNVEKSLSLSRTKDV 359
           +F ++W      + R  +KW LR+ T  CELQRI +    GAQRT  +E SL+ S+ K  
Sbjct: 1   MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNK-- 57

Query: 360 KEVISFLDRVVLEKQFVPNNFHNLLDPSISIIMRVKKINPRLHSAFISPFRSCLEQIWSY 539
                     VL+K    +   + +D  +  IM+ K INP   ++F    + CL QI  Y
Sbjct: 58  ----------VLQK--ATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGY 105

Query: 540 KNLVIEVEELRTIQFDSNNIEHEEKLLKLWSLLVPDETLESRISKQWQYIGFQGDDPKTD 719
           K L ++VE +R   +DS+N++HEE L+KLW+LL+P + L +RISKQW  IGFQGDDPKTD
Sbjct: 106 KQLYLDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTD 165

Query: 720 FRXXXXXXXXXXXXXHHNI--QEHQVMY*ATHYTPTYGYTFAIVGIN 854
           FR               N   + HQ++  + H  P  GY++AIVGIN
Sbjct: 166 FRGMGILGLINLVYFSENYTSEAHQILSRSNH--PKLGYSYAIVGIN 210


>BC028725-1|AAH28725.3|  334|Homo sapiens ELMO/CED-12 domain
           containing 1 protein.
          Length = 334

 Score =  141 bits (341), Expect = 4e-33
 Identities = 77/165 (46%), Positives = 102/165 (61%)
 Frame = +3

Query: 231 LKWFLRKTTRLCELQRICYGDIAGAQRTRNVEKSLSLSRTKDVKEVISFLDRVVLEKQFV 410
           LK+ +RK T  CELQRICY    GA RT  +E SL  S++K ++  +S            
Sbjct: 24  LKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDSKSKLLQTSVSV----------- 72

Query: 411 PNNFHNLLDPSISIIMRVKKINPRLHSAFISPFRSCLEQIWSYKNLVIEVEELRTIQFDS 590
                + ++ +I  IM +KKINP ++       ++CL QI  Y+NL+ +VE+LR   +DS
Sbjct: 73  ---HPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVEKLRREAYDS 129

Query: 591 NNIEHEEKLLKLWSLLVPDETLESRISKQWQYIGFQGDDPKTDFR 725
           +N +HEE LLKLW  L P+  LESRISKQW  IGFQGDDPKTDFR
Sbjct: 130 DNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFR 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,846,234
Number of Sequences: 237096
Number of extensions: 2695965
Number of successful extensions: 5084
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5082
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)