Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_P24
(917 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 24 1.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 5.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.8
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.8
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 24.2 bits (50), Expect = 1.7
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = +3
Query: 507 FRSCLEQIWSYKNLVIEVEELRTIQFDSNNIEHEEK-LLKLWSLLVPDETLES----RIS 671
FR + YK L +EV +D +E E K + + L +ETL++ R +
Sbjct: 151 FRQNWASLQPYKKLSVEVVRREHPFWDDQRVEQEAKRRFEKYGQLFMEETLKAAKRMRPA 210
Query: 672 KQWQYIGF 695
W Y +
Sbjct: 211 ANWGYYAY 218
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 158 SGLKQHQNTVFLLLS*LQIVHKQD 87
SG++ QN F L+ LQI+H +D
Sbjct: 828 SGIESIQNRTFNGLNNLQILHLED 851
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.6 bits (46), Expect = 5.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 765 HHNIQEHQVMY*ATHY 812
HH++ HQV+Y + Y
Sbjct: 73 HHHLHHHQVLYQQSPY 88
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 308 RMSRPGKKITKKTILGGN 325
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 308 RMSRPGKKITKKTILGGN 325
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 308 RMSRPGKKITKKTILGGN 325
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 308 RMSRPGKKITKKTILGGN 325
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 308 RMSRPGKKITKKTILGGN 325
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 308 RMSRPGKKITKKTILGGN 325
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 84 YRLKIALYLPAAQNLKXFPI 25
Y ++I+L L NLK +P+
Sbjct: 150 YSIRISLTLSCPMNLKLYPL 169
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 84 YRLKIALYLPAAQNLKXFPI 25
Y ++I+L L NLK +P+
Sbjct: 150 YSIRISLTLSCPMNLKLYPL 169
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 376 RMSRPGKKITKKTILGGN 393
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 754 RFSNPSKPIPRKSVLGSS 701
R S P K I +K++LG +
Sbjct: 376 RMSRPGKKITKKTILGGN 393
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.2 bits (45), Expect = 6.8
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 770 QYPRASSHVLSH-SLHPYIWIYFCY 841
QYP SSH+L S+ Y F Y
Sbjct: 441 QYPSTSSHILQQPSIRTYTQQQFPY 465
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,787
Number of Sequences: 438
Number of extensions: 5601
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -