Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P19
         (906 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107874-1|AAI07875.1|  327|Homo sapiens coenzyme Q5 homolog, me...   136   8e-32
BC004916-1|AAH04916.2|  325|Homo sapiens COQ5 protein protein.        135   2e-31
AK222610-1|BAD96330.1|  327|Homo sapiens hypothetical protein MG...   135   2e-31
AK057777-1|BAB71567.1|  246|Homo sapiens protein ( Homo sapiens ...   109   2e-24

>BC107874-1|AAI07875.1|  327|Homo sapiens coenzyme Q5 homolog,
           methyltransferase (S. cerevisiae) protein.
          Length = 327

 Score =  136 bits (330), Expect = 8e-32
 Identities = 85/205 (41%), Positives = 114/205 (55%), Gaps = 25/205 (12%)
 Frame = +2

Query: 278 QTHFGFQTVDENEKTKKVHEVFETVAGKYDLMNDVMSFGIHRVWKDIFMARLAPMPDTSL 457
           +THFGF+TV E EK  KV++VFE+VA KYD+MND+MS GIHRVWKD+ + ++ P+P T L
Sbjct: 51  ETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQL 110

Query: 458 LDMAGGTGDITFRYIKYLQN---------LRSKPT----EGAR-----------SSVTVC 565
           LD+AGGTGDI FR++ Y+Q+         LR++      E A+           S V VC
Sbjct: 111 LDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVC 170

Query: 566 DINQAMLDVGKARAERLGYTKESSGVDIXWLCADAEQLQ*RTTPTQHILLLLASETVPY- 742
           DIN+ ML VGK +A   GY        + W+  DAE+L           +      V + 
Sbjct: 171 DINKEMLKVGKQKALAQGYR-----AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHI 225

Query: 743 **GLXEASEC*SXGGRFMCLXXSXI 817
              L EA      GGRF+CL  S +
Sbjct: 226 DQALQEAHRVLKPGGRFLCLEFSQV 250


>BC004916-1|AAH04916.2|  325|Homo sapiens COQ5 protein protein.
          Length = 325

 Score =  135 bits (327), Expect = 2e-31
 Identities = 83/205 (40%), Positives = 111/205 (54%), Gaps = 25/205 (12%)
 Frame = +2

Query: 278 QTHFGFQTVDENEKTKKVHEVFETVAGKYDLMNDVMSFGIHRVWKDIFMARLAPMPDTSL 457
           +THFGF+TV E EK  KV++VFE+VA KYD+MND+MS GIHRVWKD+ + ++ P+P T L
Sbjct: 49  ETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQL 108

Query: 458 LDMAGGTGDITFRYIKYLQN---------LRSKPTEG---------------ARSSVTVC 565
           LD+AGGTGDI FR++ Y+Q+         LR++                     S V VC
Sbjct: 109 LDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEITKEYQNEEDSLGGSRVVVC 168

Query: 566 DINQAMLDVGKARAERLGYTKESSGVDIXWLCADAEQLQ*RTTPTQHILLLLASETVPY- 742
           DIN+ ML VGK +A   GY        + W+  DAE+L           +      V + 
Sbjct: 169 DINKEMLKVGKQKALAQGYR-----AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHI 223

Query: 743 **GLXEASEC*SXGGRFMCLXXSXI 817
              L EA      GGRF+CL  S +
Sbjct: 224 DQALQEAHRVLKPGGRFLCLEFSQV 248


>AK222610-1|BAD96330.1|  327|Homo sapiens hypothetical protein
           MGC4767 variant protein.
          Length = 327

 Score =  135 bits (327), Expect = 2e-31
 Identities = 83/205 (40%), Positives = 111/205 (54%), Gaps = 25/205 (12%)
 Frame = +2

Query: 278 QTHFGFQTVDENEKTKKVHEVFETVAGKYDLMNDVMSFGIHRVWKDIFMARLAPMPDTSL 457
           +THFGF+TV E EK  KV++VFE+VA KYD+MND+MS GIHRVWKD+ + ++ P+P T L
Sbjct: 51  ETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQL 110

Query: 458 LDMAGGTGDITFRYIKYLQN---------LRSKPTEG---------------ARSSVTVC 565
           LD+AGGTGDI FR++ Y+Q+         LR++                     S V VC
Sbjct: 111 LDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEITKEYQNEEDSLGGSRVVVC 170

Query: 566 DINQAMLDVGKARAERLGYTKESSGVDIXWLCADAEQLQ*RTTPTQHILLLLASETVPY- 742
           DIN+ ML VGK +A   GY        + W+  DAE+L           +      V + 
Sbjct: 171 DINKEMLKVGKQKALAQGYR-----AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHI 225

Query: 743 **GLXEASEC*SXGGRFMCLXXSXI 817
              L EA      GGRF+CL  S +
Sbjct: 226 DQALQEAHRVLKPGGRFLCLEFSQV 250


>AK057777-1|BAB71567.1|  246|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25048 fis, clone CBL03993. ).
          Length = 246

 Score =  109 bits (263), Expect(2) = 2e-24
 Identities = 47/76 (61%), Positives = 61/76 (80%)
 Frame = +2

Query: 278 QTHFGFQTVDENEKTKKVHEVFETVAGKYDLMNDVMSFGIHRVWKDIFMARLAPMPDTSL 457
           +THFGF+TV E EK  KV++VFE+VA KYD+MND+MS GIHRVWKD+ + ++ P+P T L
Sbjct: 51  ETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQL 110

Query: 458 LDMAGGTGDITFRYIK 505
           LD+AGGTGDI    +K
Sbjct: 111 LDVAGGTGDINKEMLK 126



 Score = 23.0 bits (47), Expect(2) = 2e-24
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 566 DINQAMLDVGKARAERLGYTK 628
           DIN+ ML VGK +A   G+ +
Sbjct: 119 DINKEMLKVGKQKALAQGHDR 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,014,276
Number of Sequences: 237096
Number of extensions: 2712543
Number of successful extensions: 5143
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5131
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)