Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_P15
(912 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.7
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 5.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 8.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 8.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 8.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 8.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 8.9
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 131 NFNNKSQRQRPRKTHHTYIPYHA-CSRNSK 45
+F + +P HHTYI Y + C R+ K
Sbjct: 27 SFLRTRTKLQPTYFHHTYIIYESLCGRHEK 56
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 131 NFNNKSQRQRPRKTHHTYIPYHA-CSRNSK 45
+F + +P HHTYI Y + C R+ K
Sbjct: 27 SFLRTRTKLQPTYFHHTYIIYESLCGRHEK 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +3
Query: 279 VKNFSKQRTVLYIFAAIAKLCSKLLFWLKSGGATKSPLG 395
+KN K V+ + +A + +L W+ + T LG
Sbjct: 461 IKNADKDNEVIEDWKFVAMVLDRLFLWVFTLACTAGTLG 499
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 92 YNYNNNYNNYNKHNYNKL 109
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 325 YNYNNNYNNYNKHNYNKL 342
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 142 YN*NKNFLEYKVDNYKKV 195
YN N N+ Y NY K+
Sbjct: 325 YNYNNNYNNYNKHNYNKL 342
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 8.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 433 TKKQRPQ*LNYKIARILETSSKVFVNFSSANLKFTVSSST 552
+KK R + +IAR ++ +SK+F S +K TV +T
Sbjct: 437 SKKPRRKFHFKQIARAVKFTSKLFGRALSRRIKATVLFAT 476
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,963
Number of Sequences: 438
Number of extensions: 4493
Number of successful extensions: 33
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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